RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 PLVAPQ9BX97 442 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 AAASQ9NRG9 546 aa18.74■□□□□ 0.59
USH1C-205ENST00000527020 ATXN2Q99700 1313 aaKnown RBP18.73■□□□□ 0.59
USH1C-205ENST00000527020 RIPK2O43353 540 aa18.73■□□□□ 0.59
USH1C-205ENST00000527020 RARGP13631 454 aa18.73■□□□□ 0.59
USH1C-205ENST00000527020 TRIM72Q6ZMU5 477 aa18.73■□□□□ 0.59
USH1C-205ENST00000527020 UBR7Q8N806 425 aa18.73■□□□□ 0.59
USH1C-205ENST00000527020 R3HDMLQ9H3Y0 253 aa18.73■□□□□ 0.59
USH1C-205ENST00000527020 R3HDM2Q9Y2K5 976 aaKnown RBP18.73■□□□□ 0.59
USH1C-205ENST00000527020 CD2APQ9Y5K6 639 aa18.73■□□□□ 0.59
USH1C-205ENST00000527020 GMNCA6NCL1 334 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 MAFO75444 373 aaPredicted RBP18.72■□□□□ 0.59
USH1C-205ENST00000527020 IVDP26440 423 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 TNFSF9P41273 254 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 TAS2R40P59535 323 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 MAMLD1Q13495 774 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 BYSLQ13895 437 aaKnown RBP18.72■□□□□ 0.59
USH1C-205ENST00000527020 PPP1R7Q15435 360 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 PLEKHA7Q6IQ23 1121 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 RHBDF2Q6PJF5 856 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 PHF13Q86YI8 300 aaPredicted RBP18.72■□□□□ 0.59
USH1C-205ENST00000527020 RAPGEF5Q92565 580 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 SGIP1Q9BQI5 828 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 FAM129AQ9BZQ8 928 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 DCLK3Q9C098 648 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 ADAM22Q9P0K1 906 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 ANK1P16157 1881 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 SRCAPQ6ZRS2 3230 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 A0A087WUV0 522 aaPredicted RBP18.72■□□□□ 0.59
USH1C-205ENST00000527020 HARSP12081 509 aaKnown RBP18.72■□□□□ 0.59
USH1C-205ENST00000527020 STAT5BP51692 787 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 ZNF132P52740 706 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 KLF1Q13351 362 aaPredicted RBP18.72■□□□□ 0.59
USH1C-205ENST00000527020 NCOA4Q13772 614 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 SLMAPQ14BN4 828 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 MDM1Q8TC05 714 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 TMEM109Q9BVC6 243 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 ADAM7Q9H2U9 754 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 AZI2Q9H6S1 392 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 NRBP2Q9NSY0 501 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 WHRNQ9P202 907 aa18.72■□□□□ 0.59
USH1C-205ENST00000527020 MSCO60682 206 aa18.71■□□□□ 0.59
USH1C-205ENST00000527020 CST3P01034 146 aaPredicted RBP18.71■□□□□ 0.59
USH1C-205ENST00000527020 TBXAS1P24557 533 aaPredicted RBP18.71■□□□□ 0.59
USH1C-205ENST00000527020 TCF7P36402 384 aaPredicted RBP18.71■□□□□ 0.59
USH1C-205ENST00000527020 MMS22LQ6ZRQ5 1243 aa18.71■□□□□ 0.59
USH1C-205ENST00000527020 ANKS1BQ7Z6G8 1248 aa18.71■□□□□ 0.59
USH1C-205ENST00000527020 TADA2BQ86TJ2 420 aa18.71■□□□□ 0.59
USH1C-205ENST00000527020 BRSK2Q8IWQ3 736 aa18.71■□□□□ 0.59
USH1C-205ENST00000527020 UHMK1Q8TAS1 419 aaKnown RBP18.71■□□□□ 0.59
USH1C-205ENST00000527020 PRPF31Q8WWY3 499 aaKnown RBP18.71■□□□□ 0.59
USH1C-205ENST00000527020 VCPIP1Q96JH7 1222 aa18.71■□□□□ 0.59
USH1C-205ENST00000527020 CCDC113Q9H0I3 377 aa18.71■□□□□ 0.59
USH1C-205ENST00000527020 GJB6O95452 261 aa18.71■□□□□ 0.59
USH1C-205ENST00000527020 IFI35P80217 286 aaPredicted RBP18.71■□□□□ 0.59
USH1C-205ENST00000527020 SLC20A2Q08357 652 aa18.71■□□□□ 0.59
USH1C-205ENST00000527020 PTK6Q13882 451 aa18.71■□□□□ 0.59
USH1C-205ENST00000527020 QPCTQ16769 361 aa18.71■□□□□ 0.59
USH1C-205ENST00000527020 EPS8L3Q8TE67 593 aaKnown RBP18.71■□□□□ 0.59
USH1C-205ENST00000527020 TLDC2A0PJX2 215 aa18.7■□□□□ 0.58
USH1C-205ENST00000527020 THAP12O43422 761 aa18.7■□□□□ 0.58
USH1C-205ENST00000527020 RALAP11233 206 aa18.7■□□□□ 0.58
USH1C-205ENST00000527020 LY6KQ17RY6 165 aa18.7■□□□□ 0.58
USH1C-205ENST00000527020 TNFAIP8L3Q5GJ75 292 aa18.7■□□□□ 0.58
USH1C-205ENST00000527020 LIN9Q5TKA1 542 aa18.7■□□□□ 0.58
USH1C-205ENST00000527020 ZPBP2Q6X784 338 aa18.7■□□□□ 0.58
USH1C-205ENST00000527020 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.7■□□□□ 0.58
USH1C-205ENST00000527020 SPATS2Q86XZ4 545 aaKnown RBP18.7■□□□□ 0.58
USH1C-205ENST00000527020 PPM1EQ8WY54 764 aa18.7■□□□□ 0.58
USH1C-205ENST00000527020 SPATC1LQ9H0A9 340 aa18.7■□□□□ 0.58
USH1C-205ENST00000527020 CNOT10Q9H9A5 744 aaKnown RBP18.7■□□□□ 0.58
USH1C-205ENST00000527020 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.7■□□□□ 0.58
USH1C-205ENST00000527020 NEU2Q9Y3R4 380 aa18.7■□□□□ 0.58
USH1C-205ENST00000527020 MCM3APO60318 1980 aa18.7■□□□□ 0.58
USH1C-205ENST00000527020 SMIM23A6NLE4 172 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 PSTPIP1O43586 416 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 ARIH2O95376 493 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 ASS1P00966 412 aaKnown RBP18.69■□□□□ 0.58
USH1C-205ENST00000527020 MMP13P45452 471 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 C1QBPQ07021 282 aaKnown RBP18.69■□□□□ 0.58
USH1C-205ENST00000527020 CALCOCO2Q13137 446 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 NEDD9Q14511 834 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 FAM160B1Q5W0V3 765 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 C6orf89Q6UWU4 347 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 EEPD1Q7L9B9 569 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 MAIP1Q8WWC4 291 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 ZNF606Q8WXB4 792 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 SEPT1Q8WYJ6 367 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 HEMGNQ9BXL5 484 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 ABLIM1O14639 778 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 MEFVO15553 781 aaPredicted RBP18.69■□□□□ 0.58
USH1C-205ENST00000527020 CPP00450 1065 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 CHKAP35790 457 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 ADCY2Q08462 1091 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 CDCA2Q69YH5 1023 aaPredicted RBP18.69■□□□□ 0.58
USH1C-205ENST00000527020 METTL7BQ6UX53 244 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 ZBTB33Q86T24 672 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 CCDC25Q86WR0 208 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 NCAPG2Q86XI2 1143 aa18.69■□□□□ 0.58
USH1C-205ENST00000527020 RHOT1Q8IXI2 618 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms