RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 BICD1Q96G01 975 aa12.4□□□□□ -0.42
LINC01001-201ENST00000526704 C11orf70Q9BRQ4 267 aa12.4□□□□□ -0.42
LINC01001-201ENST00000526704 KCNK9Q9NPC2 374 aa12.4□□□□□ -0.42
LINC01001-201ENST00000526704 ZNF277Q9NRM2 450 aaPredicted RBP12.4□□□□□ -0.42
LINC01001-201ENST00000526704 ARHGAP28Q9P2N2 729 aa12.4□□□□□ -0.42
LINC01001-201ENST00000526704 GGT7Q9UJ14 662 aa12.4□□□□□ -0.42
LINC01001-201ENST00000526704 MCM8Q9UJA3 840 aa12.4□□□□□ -0.42
LINC01001-201ENST00000526704 CEP83Q9Y592 693 aa12.4□□□□□ -0.42
LINC01001-201ENST00000526704 LOC285556D6RIA3 1793 aa12.4□□□□□ -0.43
LINC01001-201ENST00000526704 VNN1O95497 513 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 BRAFP15056 766 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 DSG3P32926 999 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 ZACNQ401N2 412 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 GALNTL6Q49A17 601 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 RPAINQ86UA6 219 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 NLRX1Q86UT6 975 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 PASD1Q8IV76 773 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 KATNAL2Q8IYT4 538 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 WNK4Q96J92 1243 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 EURLQ9NYK6 297 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 EXTL3O43909 919 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 KCNA2P16389 499 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 KLRC2P26717 231 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 PIK3CAP42336 1068 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 RTP1P59025 263 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 NOMO3P69849 1222 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 PSMD6Q15008 389 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 CCNG2Q16589 344 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 IZUMO3Q5VZ72 239 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 NUGGCQ68CJ6 796 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 CGB2Q6NT52 195 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 PRUNE1Q86TP1 453 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 RHOT1Q8IXI2 618 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 OSBPL8Q9BZF1 889 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 POLR3FQ9H1D9 316 aaPredicted RBP12.39□□□□□ -0.43
LINC01001-201ENST00000526704 NOD2Q9HC29 1040 aa12.39□□□□□ -0.43
LINC01001-201ENST00000526704 CFAP73A6NFT4 308 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 WNT10BO00744 389 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 DGAT1O75907 488 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 GJB6O95452 261 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 C4BPAP04003 597 aaKnown RBP12.38□□□□□ -0.43
LINC01001-201ENST00000526704 CD58P19256 250 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 CCND2P30279 289 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 SSTR3P32745 418 aaPredicted RBP12.38□□□□□ -0.43
LINC01001-201ENST00000526704 NLRP11P59045 1033 aaKnown RBP12.38□□□□□ -0.43
LINC01001-201ENST00000526704 BPIFB4P59827 614 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 MAMLD1Q13495 774 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 TMEM63BQ5T3F8 832 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 SEPT14Q6ZU15 432 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 TBC1D1Q86TI0 1168 aaPredicted RBP12.38□□□□□ -0.43
LINC01001-201ENST00000526704 CEP57Q86XR8 500 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 RELL1Q8IUW5 271 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 MCPH1Q8NEM0 835 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 ATP6V0A1Q93050 837 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 GPRASP2Q96D09 838 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 APOBEC3GQ9HC16 384 aaKnown RBP12.38□□□□□ -0.43
LINC01001-201ENST00000526704 DONSONQ9NYP3 566 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 TBK1Q9UHD2 729 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 SEPT9Q9UHD8 586 aaPredicted RBP12.38□□□□□ -0.43
LINC01001-201ENST00000526704 RIPK3Q9Y572 518 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 MGAMO43451 1857 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 SUN1O94901 812 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 GJC1P36383 396 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 BAATQ14032 418 aaPredicted RBP12.38□□□□□ -0.43
LINC01001-201ENST00000526704 ZKSCAN8Q15776 578 aaPredicted RBP12.38□□□□□ -0.43
LINC01001-201ENST00000526704 WDR44Q5JSH3 913 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 LIN9Q5TKA1 542 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 ZNF365Q70YC5 407 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 SPATA21Q7Z572 469 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 VSIG10LQ86VR7 867 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 CCDC60Q8IWA6 550 aaPredicted RBP12.38□□□□□ -0.43
LINC01001-201ENST00000526704 TCP11Q8WWU5 503 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 C9orf72Q96LT7 481 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 TGS1Q96RS0 853 aaKnown RBP12.38□□□□□ -0.43
LINC01001-201ENST00000526704 TACO1Q9BSH4 297 aaKnown RBP12.38□□□□□ -0.43
LINC01001-201ENST00000526704 HAPLN2Q9GZV7 340 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 ATP6V0A4Q9HBG4 840 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 ADAM22Q9P0K1 906 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 PRKAG3Q9UGI9 489 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 NAALADL1Q9UQQ1 740 aa12.38□□□□□ -0.43
LINC01001-201ENST00000526704 CDH16O75309 829 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 RGS20O76081 388 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 TNNI1P19237 187 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 SLC8A1P32418 973 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 LIG4P49917 911 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 KCNJ2P63252 427 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 PRKCEQ02156 737 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 MTMR2Q13614 643 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 CUL2Q13617 745 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 NEDD9Q14511 834 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 E2F5Q15329 346 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 PLEKHA7Q6IQ23 1121 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 SWSAP1Q6NVH7 229 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 SRRM1Q8IYB3 904 aaKnown RBP12.37□□□□□ -0.43
LINC01001-201ENST00000526704 CCDC89Q8N998 374 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 EXD1Q8NHP7 514 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.37□□□□□ -0.43
LINC01001-201ENST00000526704 RPAP3Q9H6T3 665 aaPredicted RBP12.37□□□□□ -0.43
LINC01001-201ENST00000526704 ECT2Q9H8V3 914 aa12.37□□□□□ -0.43
LINC01001-201ENST00000526704 CYP26B1Q9NR63 512 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms