RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 HIF1AQ16665 826 aa7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 MROH9Q5TGP6 573 aa7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 ZCCHC23Q6ZST2 131 aa7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 TMEM179Q6ZVK1 233 aa7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 ZNF720Q7Z2F6 126 aa7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 PCGF5Q86SE9 256 aa7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 LRRC6Q86X45 466 aa7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 MORC4Q8TE76 937 aa7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 SNRNP27Q8WVK2 155 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 RNF34Q969K3 372 aa7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 IWS1Q96ST2 819 aa7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 UNKQ9C0B0 810 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 MIS12Q9H081 205 aa7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 VPS11Q9H270 941 aa7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 FZD1Q9UP38 647 aa7.34□□□□□ -1.23
TGFBR3-207ENST00000525962 A0A1W2PPM1 405 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 NOP56O00567 594 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 NDC80O14777 642 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 TGFB1I1O43294 461 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 CST8O60676 142 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 TTC4O95801 387 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 RPA3P35244 121 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 TMEM259Q4ZIN3 620 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 SWT1Q5T5J6 900 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 KDELC2Q7Z4H8 507 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 RHOT1Q8IXI2 618 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 CYP4X1Q8N118 509 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 RNF148Q8N7C7 305 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 CCT6BQ92526 530 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 ATP2A3Q93084 1043 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 RPS6KC1Q96S38 1066 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 NUF2Q9BZD4 464 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 ACSS2Q9NR19 701 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 FBXO6Q9NRD1 293 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 NINJ2Q9NZG7 142 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 SLC9A2Q9UBY0 812 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 FNDC3AQ9Y2H6 1198 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 USP54Q70EL1 1684 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 H0YIN7 160 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 O00370 1275 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 CPP00450 1065 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 FNTAP49354 379 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 NRLP54845 237 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 SESN2P58004 480 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 NCALDP61601 193 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 DEUP1Q05D60 604 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 TFDP1Q14186 410 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 CRYMQ14894 314 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 FASTKD3Q14CZ7 662 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 COL23A1Q86Y22 540 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 HACE1Q8IYU2 909 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 C1orf131Q8NDD1 294 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 FGD4Q96M96 766 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 PCDHB18PQ96TA0 734 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 TSSK1BQ9BXA7 367 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 MRPL47Q9HD33 250 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 KCNH7Q9NS40 1196 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 PCMTD2Q9NV79 361 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 SLC12A6Q9UHW9 1150 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 ZC3H4Q9UPT8 1303 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 ARHGAP23Q9P227 1491 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 hCG_1984214I3L0E3 225 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 MCF2LO15068 1137 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 TJP3O95049 919 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 ITIH2P19823 946 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 BGNP21810 368 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 FECHP22830 423 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 SHMT1P34896 483 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 DUPD1Q68J44 220 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 RAPH1Q70E73 1250 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 TRMT10CQ7L0Y3 403 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 BZW1Q7L1Q6 419 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 GALNT4Q8N4A0 578 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 ZNF713Q8N859 430 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 AGAP3Q96P47 875 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 TARS2Q9BW92 718 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 FHDC1Q9C0D6 1143 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 RAB6BQ9NRW1 208 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 LRRC4BQ9NT99 713 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 MCM8Q9UJA3 840 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 DNPEPQ9ULA0 475 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 FAM208AQ9UK61 1670 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 NFIBO00712 420 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 SPATA31C1P0DKV0 1188 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 PECAM1P16284 738 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 POLD1P28340 1107 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 SERPINB3P29508 390 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 ARL4CP56559 192 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 PSMC1P62191 440 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 RRP1BQ14684 758 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 KPNB1Q14974 876 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 EFTUD2Q15029 972 aaKnown RBP eCLIP7.33□□□□□ -1.245e-6■■■■□ 20.9
TGFBR3-207ENST00000525962 CYTH1Q15438 398 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 ASTE1Q2TB18 679 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 ZBTB46Q86UZ6 589 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 NUDCD3Q8IVD9 361 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 CCDC97Q96F63 343 aaPredicted RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 HEXIM2Q96MH2 286 aaKnown RBP7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 SENP7Q9BQF6 1050 aa7.33□□□□□ -1.24
TGFBR3-207ENST00000525962 CEP41Q9BYV8 373 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms