RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 CA8P35219 290 aa21.42■■□□□ 1.02
EXOSC4-202ENST00000525936 PUS10Q3MIT2 529 aaKnown RBP21.42■■□□□ 1.02
EXOSC4-202ENST00000525936 EP400NLQ6ZTU2 488 aa21.42■■□□□ 1.02
EXOSC4-202ENST00000525936 CXorf38Q8TB03 319 aa21.42■■□□□ 1.02
EXOSC4-202ENST00000525936 CLSTN3Q9BQT9 956 aa21.42■■□□□ 1.02
EXOSC4-202ENST00000525936 S1PR5Q9H228 398 aa21.42■■□□□ 1.02
EXOSC4-202ENST00000525936 PDE11AQ9HCR9 933 aa21.42■■□□□ 1.02
EXOSC4-202ENST00000525936 DPP3Q9NY33 737 aa21.42■■□□□ 1.02
EXOSC4-202ENST00000525936 TRAF3IP3Q9Y228 551 aa21.42■■□□□ 1.02
EXOSC4-202ENST00000525936 MUC3AQ02505 3323 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 GRXCR2A6NFK2 248 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 M0QZQ0 153 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 PPEF2O14830 753 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 SYN3O14994 580 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 KINO60870 393 aaKnown RBP21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 EPCAMP16422 314 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 PAX3P23760 479 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 KLRC2P26717 231 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 LILRA4P59901 499 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 CREMQ03060 361 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 MRPL58Q14197 206 aaKnown RBP21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 MYBPC2Q14324 1141 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 SNRNP35Q16560 246 aaKnown RBP21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 COBLL1Q53SF7 1204 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 ANKRD54Q6NXT1 300 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 LLGL2Q6P1M3 1020 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 PDXDC1Q6P996 788 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 LILRA6Q6PI73 481 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 SYCE2Q6PIF2 218 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 PRSS55Q6UWB4 352 aaPredicted RBP21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 CEP57Q86XR8 500 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 SMRP1Q8NCR6 262 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 CASP10Q92851 521 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 MFSD14AQ96MC6 490 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 RMND1Q9NWS8 449 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 CD207Q9UJ71 328 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 HOOK1Q9UJC3 728 aaKnown RBP21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 NUB1Q9Y5A7 615 aa21.41■■□□□ 1.02
EXOSC4-202ENST00000525936 TBC1D4O60343 1298 aa21.4■■□□□ 1.02
EXOSC4-202ENST00000525936 KIF20AO95235 890 aa21.4■■□□□ 1.02
EXOSC4-202ENST00000525936 SMC2O95347 1197 aa21.4■■□□□ 1.02
EXOSC4-202ENST00000525936 ADH1AP07327 375 aa21.4■■□□□ 1.02
EXOSC4-202ENST00000525936 HOXB8P17481 243 aaPredicted RBP21.4■■□□□ 1.02
EXOSC4-202ENST00000525936 TKTP29401 623 aaKnown RBP21.4■■□□□ 1.02
EXOSC4-202ENST00000525936 NFIL3Q16649 462 aa21.4■■□□□ 1.02
EXOSC4-202ENST00000525936 ERCC4Q92889 916 aaPredicted RBP21.4■■□□□ 1.02
EXOSC4-202ENST00000525936 GZF1Q9H116 711 aaPredicted RBP21.4■■□□□ 1.02
EXOSC4-202ENST00000525936 MTRRQ9UBK8 725 aa21.4■■□□□ 1.02
EXOSC4-202ENST00000525936 BACE2Q9Y5Z0 518 aa21.4■■□□□ 1.02
EXOSC4-202ENST00000525936 SPTLC1O15269 473 aa21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 PAPLNO95428 1278 aa21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 SRGAP2BP0DMP2 458 aa21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 CYP2J2P51589 502 aa21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 SMAD4Q13485 552 aaKnown RBP21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 SURF1Q15526 300 aa21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 PSMD5Q16401 504 aa21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 ZNF658Q5TYW1 1059 aaPredicted RBP21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 PTCRAQ6ISU1 281 aaPredicted RBP21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 RSPO2Q6UXX9 243 aaPredicted RBP21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 SMARCE1Q969G3 411 aa21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 BORCS6Q96GS4 357 aa21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 INTS13Q9NVM9 706 aa21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 PCDHB8Q9UN66 801 aa21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 MAPK8IP1Q9UQF2 711 aa21.39■■□□□ 1.01
EXOSC4-202ENST00000525936 PTPRJQ12913 1337 aa21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 ADAM12O43184 909 aa21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 MBTPS2O43462 519 aa21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 RPL17P18621 184 aaKnown RBP21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 MCM4P33991 863 aa21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 CYP24A1Q07973 514 aa21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 PSMD6Q15008 389 aa21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 SMAD2Q15796 467 aaKnown RBP21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 CLUL1Q15846 466 aa21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 ZCWPW2Q504Y3 356 aa21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 VARS2Q5ST30 1063 aaKnown RBP21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 ANKS3Q6ZW76 656 aa21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 SMYD4Q8IYR2 804 aaPredicted RBP21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 C1orf127Q8N9H9 656 aa21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 RDH13Q8NBN7 331 aa21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 HDAC7Q8WUI4 952 aa21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 CACTINQ8WUQ7 758 aaKnown RBP21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 GTPBP4Q9BZE4 634 aaKnown RBP21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 DZANK1Q9NVP4 752 aa21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 NCOR1O75376 2440 aa21.38■■□□□ 1.01
EXOSC4-202ENST00000525936 CUL9Q8IWT3 2517 aa21.37■■□□□ 1.01
EXOSC4-202ENST00000525936 TGM5O43548 720 aa21.37■■□□□ 1.01
EXOSC4-202ENST00000525936 EXOC3O60645 756 aa21.37■■□□□ 1.01
EXOSC4-202ENST00000525936 OAZ2O95190 189 aa21.37■■□□□ 1.01
EXOSC4-202ENST00000525936 NR3C1P04150 777 aa21.37■■□□□ 1.01
EXOSC4-202ENST00000525936 TFAMQ00059 246 aaKnown RBP21.37■■□□□ 1.01
EXOSC4-202ENST00000525936 RAB33AQ14088 237 aa21.37■■□□□ 1.01
EXOSC4-202ENST00000525936 SCARA3Q6AZY7 606 aa21.37■■□□□ 1.01
EXOSC4-202ENST00000525936 APPL2Q8NEU8 664 aa21.37■■□□□ 1.01
EXOSC4-202ENST00000525936 NOC3LQ8WTT2 800 aaKnown RBP21.37■■□□□ 1.01
EXOSC4-202ENST00000525936 SUSD6Q92537 303 aa21.37■■□□□ 1.01
EXOSC4-202ENST00000525936 SCN1AP35498 2009 aa21.36■■□□□ 1.01
EXOSC4-202ENST00000525936 CALUO43852 315 aaPredicted RBP21.36■■□□□ 1.01
EXOSC4-202ENST00000525936 GLUD1P00367 558 aa21.36■■□□□ 1.01
EXOSC4-202ENST00000525936 PRCPP42785 496 aa21.36■■□□□ 1.01
EXOSC4-202ENST00000525936 MCCD1P59942 119 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms