RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 NELL1Q92832 810 aa11.69□□□□□ -0.54
VPS26B-203ENST00000525918 IRF7Q92985 503 aa11.69□□□□□ -0.54
VPS26B-203ENST00000525918 SUSD3Q96L08 255 aa11.69□□□□□ -0.54
VPS26B-203ENST00000525918 ZNF512Q96ME7 567 aaPredicted RBP11.69□□□□□ -0.54
VPS26B-203ENST00000525918 NTPCRQ9BSD7 190 aaKnown RBP11.69□□□□□ -0.54
VPS26B-203ENST00000525918 TRMT61BQ9BVS5 477 aaKnown RBP11.69□□□□□ -0.54
VPS26B-203ENST00000525918 ZFP14Q9HCL3 533 aa11.69□□□□□ -0.54
VPS26B-203ENST00000525918 ZSCAN32Q9NX65 697 aa11.69□□□□□ -0.54
VPS26B-203ENST00000525918 DLL3Q9NYJ7 618 aa11.69□□□□□ -0.54
VPS26B-203ENST00000525918 NCDNQ9UBB6 729 aa11.69□□□□□ -0.54
VPS26B-203ENST00000525918 FBXL5Q9UKA1 691 aa11.69□□□□□ -0.54
VPS26B-203ENST00000525918 INSL5Q9Y5Q6 135 aa11.69□□□□□ -0.54
VPS26B-203ENST00000525918 COL4A2P08572 1712 aa11.69□□□□□ -0.54
VPS26B-203ENST00000525918 LAD1O00515 517 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 MAN2B1O00754 1011 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 ABLIM1O14639 778 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 SEC24AO95486 1093 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 FCARP24071 287 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 U2AF2P26368 475 aaKnown RBP eCLIP11.68□□□□□ -0.54
VPS26B-203ENST00000525918 TOB1P50616 345 aaPredicted RBP11.68□□□□□ -0.54
VPS26B-203ENST00000525918 STRN3Q13033 797 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 FAM78AQ5JUQ0 283 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 IQCEQ6IPM2 695 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 ZNF280DQ6N043 979 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 C1orf186Q6ZWK4 172 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 APPL2Q8NEU8 664 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 SECISBP2LQ93073 1101 aaKnown RBP11.68□□□□□ -0.54
VPS26B-203ENST00000525918 C18orf25Q96B23 403 aaPredicted RBP11.68□□□□□ -0.54
VPS26B-203ENST00000525918 TCEAL4Q96EI5 215 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 ZSCAN31Q96LW9 406 aaPredicted RBP11.68□□□□□ -0.54
VPS26B-203ENST00000525918 ASB16Q96NS5 453 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 TIPINQ9BVW5 301 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 FAM126AQ9BYI3 521 aaPredicted RBP11.68□□□□□ -0.54
VPS26B-203ENST00000525918 BRD9Q9H8M2 597 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 TRPV5Q9NQA5 729 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 PCDHB6Q9Y5E3 794 aa11.68□□□□□ -0.54
VPS26B-203ENST00000525918 MED19A0JLT2 244 aaPredicted RBP11.67□□□□□ -0.54
VPS26B-203ENST00000525918 SHISA7A6NL88 538 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 SFI1A8K8P3 1242 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 SLC16A4O15374 487 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 LILRB5O75023 590 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 TOM1L1O75674 476 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 PSMC3P17980 439 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 SDHBP21912 280 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 MARCKSP29966 332 aaPredicted RBP11.67□□□□□ -0.54
VPS26B-203ENST00000525918 MCM4P33991 863 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 PRPHP41219 470 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 CCR2P41597 374 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 SMTNP53814 917 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 MTAPQ13126 283 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 MAPK7Q13164 816 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 GRM2Q14416 872 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 SLC10A6Q3KNW5 377 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 DTHD1Q6ZMT9 781 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 MAMSTRQ6ZN01 415 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 LEMD2Q8NC56 503 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 SPIRE2Q8WWL2 714 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 DDX12PQ92771 950 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 SMARCD2Q92925 531 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 ZBTB45Q96K62 511 aaPredicted RBP11.67□□□□□ -0.54
VPS26B-203ENST00000525918 TBC1D32Q96NH3 1257 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 RUSC1Q9BVN2 902 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 EPC1Q9H2F5 836 aa11.67□□□□□ -0.54
VPS26B-203ENST00000525918 ZNF334Q9HCZ1 680 aaPredicted RBP11.67□□□□□ -0.54
VPS26B-203ENST00000525918 PRMT8Q9NR22 394 aaPredicted RBP11.67□□□□□ -0.54
VPS26B-203ENST00000525918 SH2B1Q9NRF2 756 aaPredicted RBP11.67□□□□□ -0.54
VPS26B-203ENST00000525918 AFF4Q9UHB7 1163 aaKnown RBP11.67□□□□□ -0.54
VPS26B-203ENST00000525918 ANK1P16157 1881 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 PP2D1A8MPX8 630 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 CLDN3O15551 220 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 MEFVO15553 781 aaPredicted RBP11.66□□□□□ -0.54
VPS26B-203ENST00000525918 SEC24BO95487 1268 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 HARSP12081 509 aaKnown RBP11.66□□□□□ -0.54
VPS26B-203ENST00000525918 CPB1P15086 417 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 GUCY2CP25092 1073 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 CDC25AP30304 524 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 EPHA5P54756 1037 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 NRLP54845 237 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 TWF1Q12792 350 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 PPP2R5DQ14738 602 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 NOLC1Q14978 699 aaKnown RBP eCLIP11.66□□□□□ -0.54
VPS26B-203ENST00000525918 IL17AQ16552 155 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 RSPO4Q2I0M5 234 aaPredicted RBP11.66□□□□□ -0.54
VPS26B-203ENST00000525918 TSSK4Q6SA08 328 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 ZPBP2Q6X784 338 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 MAP4K3Q8IVH8 894 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 HS6ST3Q8IZP7 471 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 ZNF687Q8N1G0 1237 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 KCTD17Q8N5Z5 321 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 DEPDC1BQ8WUY9 529 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 ZSWIM3Q96MP5 696 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 IER2Q9BTL4 223 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 MMTAG2Q9BU76 263 aaKnown RBP11.66□□□□□ -0.54
VPS26B-203ENST00000525918 OXCT2Q9BYC2 517 aaPredicted RBP11.66□□□□□ -0.54
VPS26B-203ENST00000525918 GPR88Q9GZN0 384 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 PLEKHA5Q9HAU0 1116 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 TRPV4Q9HBA0 871 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 ASAH2Q9NR71 780 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 PPP4R2Q9NY27 417 aa11.66□□□□□ -0.54
VPS26B-203ENST00000525918 CEP72Q9P209 647 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms