RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 POMKQ9H5K3 350 aa12.89□□□□□ -0.35
CDC27-202ENST00000525495 TMEM206Q9H813 350 aa12.89□□□□□ -0.35
CDC27-202ENST00000525495 UBQLN1Q9UMX0 589 aaKnown RBP12.89□□□□□ -0.35
CDC27-202ENST00000525495 SCN1AP35498 2009 aa12.89□□□□□ -0.35
CDC27-202ENST00000525495 PVALEFA0A1B0GWK0 134 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 GOLGA8IPA6NC78 632 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 GOLGA8JA6NMD2 632 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 PPEF2O14830 753 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 EIF3DO15371 548 aaKnown RBP eCLIP12.88□□□□□ -0.35
CDC27-202ENST00000525495 TRAPPC3O43617 180 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 RFPL2O75678 378 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 CYP3A5P20815 502 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 GARTP22102 1010 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 SYKP43405 635 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 SPATA1Q5VX52 437 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 CES5AQ6NT32 575 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 CD302Q8IX05 232 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 EFCAB13Q8IY85 973 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 FSIP1Q8NA03 581 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 ZNF507Q8TCN5 953 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 SCFD1Q8WVM8 642 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 PHF7Q9BWX1 381 aaPredicted RBP12.88□□□□□ -0.35
CDC27-202ENST00000525495 PCIF1Q9H4Z3 704 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 ASB7Q9H672 318 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 SFXN1Q9H9B4 322 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 SLC39A2Q9NP94 309 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 MTRRQ9UBK8 725 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 NUB1Q9Y5A7 615 aa12.88□□□□□ -0.35
CDC27-202ENST00000525495 DOCK6Q96HP0 2047 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 LOC730098B7Z3J9 87 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 TGFB1I1O43294 461 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 SP100P23497 879 aaPredicted RBP12.87□□□□□ -0.35
CDC27-202ENST00000525495 MCM4P33991 863 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 AARSP49588 968 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDC27-202ENST00000525495 CREMQ03060 361 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 TMEM132DQ14C87 1099 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 VARS2Q5ST30 1063 aaKnown RBP12.87□□□□□ -0.35
CDC27-202ENST00000525495 ARMCX5Q6P1M9 558 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 STXBP4Q6ZWJ1 553 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 GPR149Q86SP6 731 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 NELFCDQ8IXH7 590 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 FAM84AQ96KN4 292 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 RPGRIP1Q96KN7 1286 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 SUSD3Q96L08 255 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 TSPAN18Q96SJ8 248 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 EPHX3Q9H6B9 360 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 USP25Q9UHP3 1055 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 C2CD2Q9Y426 696 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 TRIOO75962 3097 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 TSC2P49815 1807 aa12.87□□□□□ -0.35
CDC27-202ENST00000525495 XPOTO43592 962 aaKnown RBP12.86□□□□□ -0.35
CDC27-202ENST00000525495 OR1D2P34982 312 aa12.86□□□□□ -0.35
CDC27-202ENST00000525495 POU5F1Q01860 360 aaKnown RBP12.86□□□□□ -0.35
CDC27-202ENST00000525495 STK4Q13043 487 aa12.86□□□□□ -0.35
CDC27-202ENST00000525495 KMT5BQ4FZB7 885 aa12.86□□□□□ -0.35
CDC27-202ENST00000525495 SCARA3Q6AZY7 606 aa12.86□□□□□ -0.35
CDC27-202ENST00000525495 PDXDC1Q6P996 788 aa12.86□□□□□ -0.35
CDC27-202ENST00000525495 ANKS3Q6ZW76 656 aa12.86□□□□□ -0.35
CDC27-202ENST00000525495 BRSK2Q8IWQ3 736 aa12.86□□□□□ -0.35
CDC27-202ENST00000525495 KIAA0895Q8NCT3 520 aa12.86□□□□□ -0.35
CDC27-202ENST00000525495 KREMEN2Q8NCW0 462 aa12.86□□□□□ -0.35
CDC27-202ENST00000525495 BEST2Q8NFU1 509 aa12.86□□□□□ -0.35
CDC27-202ENST00000525495 POP1Q99575 1024 aaKnown RBP12.86□□□□□ -0.35
CDC27-202ENST00000525495 FBXW11Q9UKB1 542 aa12.86□□□□□ -0.35
CDC27-202ENST00000525495 DERAQ9Y315 318 aa12.86□□□□□ -0.35
CDC27-202ENST00000525495 BACE2Q9Y5Z0 518 aa12.86□□□□□ -0.35
CDC27-202ENST00000525495 CDY1Q9Y6F8 540 aa12.86□□□□□ -0.35
CDC27-202ENST00000525495 CCDC195A0A1B0GUA6 201 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 ANO9A1A5B4 782 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 M0QZQ0 153 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 PIRO00625 290 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 SYN3O14994 580 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 SPTLC1O15269 473 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 EXTL3O43909 919 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 TBC1D4O60343 1298 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 ZNF202O95125 648 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 LDHAP00338 332 aaKnown RBP12.85□□□□□ -0.35
CDC27-202ENST00000525495 C1RP00736 705 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 MTHFRP42898 656 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 RAB33AQ14088 237 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 MRPL58Q14197 206 aaKnown RBP12.85□□□□□ -0.35
CDC27-202ENST00000525495 BMT2Q1RMZ1 405 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 ATAT1Q5SQI0 421 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 C9orf57Q5W0N0 161 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 KRBA2Q6ZNG9 492 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 RNF135Q8IUD6 432 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 CBWD2Q8IUF1 395 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 GPD1LQ8N335 351 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 CMASQ8NFW8 434 aaPredicted RBP12.85□□□□□ -0.35
CDC27-202ENST00000525495 NOC3LQ8WTT2 800 aaKnown RBP12.85□□□□□ -0.35
CDC27-202ENST00000525495 ZNF707Q96C28 371 aaPredicted RBP12.85□□□□□ -0.35
CDC27-202ENST00000525495 RIPOR3Q96MK2 946 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 PLEKHA4Q9H4M7 779 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 AGPAT3Q9NRZ7 376 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 RBAKQ9NYW8 714 aaPredicted RBP12.85□□□□□ -0.35
CDC27-202ENST00000525495 TIMM13Q9Y5L4 95 aaPredicted RBP12.85□□□□□ -0.35
CDC27-202ENST00000525495 UBE4BO95155 1302 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
CDC27-202ENST00000525495 CLIC2O15247 247 aa12.85□□□□□ -0.35
CDC27-202ENST00000525495 IL18RAPO95256 599 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms