RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 IGSF9Q9P2J2 1179 aa20.17■□□□□ 0.82
CAPN1-203ENST00000525013 CPSF3Q9UKF6 684 aaKnown RBP20.17■□□□□ 0.82
CAPN1-203ENST00000525013 AGO2Q9UKV8 859 aaKnown RBP20.17■□□□□ 0.82
CAPN1-203ENST00000525013 TULP1O00294 542 aaPredicted RBP20.16■□□□□ 0.82
CAPN1-203ENST00000525013 PPP6R2O75170 966 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 GCNT3O95395 438 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 YEATS4O95619 227 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 PDGFBP01127 241 aaPredicted RBP20.16■□□□□ 0.82
CAPN1-203ENST00000525013 CYP3A5P20815 502 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 LRPAP1P30533 357 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 HOXA9P31269 272 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 ELF1P32519 619 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 NTHL1P78549 312 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 ROR1Q01973 937 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 JADE1Q6IE81 842 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 CD302Q8IX05 232 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 ZNF461Q8TAF7 563 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 POMGNT1Q8WZA1 660 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 TSPAN18Q96SJ8 248 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 IKZF4Q9H2S9 585 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 PANK4Q9NVE7 773 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 EPS15L1Q9UBC2 864 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 FBXL5Q9UKA1 691 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 EXOC7Q9UPT5 735 aa20.16■□□□□ 0.82
CAPN1-203ENST00000525013 PRRG1O14668 218 aa20.15■□□□□ 0.82
CAPN1-203ENST00000525013 F13A1P00488 732 aa20.15■□□□□ 0.82
CAPN1-203ENST00000525013 TMEM132DQ14C87 1099 aa20.15■□□□□ 0.82
CAPN1-203ENST00000525013 SLC8B1Q6J4K2 584 aa20.15■□□□□ 0.82
CAPN1-203ENST00000525013 ZNF280DQ6N043 979 aa20.15■□□□□ 0.82
CAPN1-203ENST00000525013 BEST2Q8NFU1 509 aa20.15■□□□□ 0.82
CAPN1-203ENST00000525013 RSAD2Q8WXG1 361 aa20.15■□□□□ 0.82
CAPN1-203ENST00000525013 ACCSQ96QU6 501 aa20.15■□□□□ 0.82
CAPN1-203ENST00000525013 PCDHB8Q9UN66 801 aa20.15■□□□□ 0.82
CAPN1-203ENST00000525013 PCDHB13Q9Y5F0 798 aa20.15■□□□□ 0.82
CAPN1-203ENST00000525013 NOTCH4Q99466 2003 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 KMT2EQ8IZD2 1858 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 WDR27A2RRH5 827 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 TBC1D4O60343 1298 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 CUTAO60888 179 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 PPP1R37O75864 691 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 ADRB2P07550 413 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 NFICP08651 508 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 LAMP2P13473 410 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 KCNA1Q09470 495 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 MRPL58Q14197 206 aaKnown RBP20.14■□□□□ 0.81
CAPN1-203ENST00000525013 POSTNQ15063 836 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 L1TD1Q5T7N2 865 aaKnown RBP20.14■□□□□ 0.81
CAPN1-203ENST00000525013 SPATA1Q5VX52 437 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 DSTYKQ6XUX3 929 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 RTL10Q7L3V2 364 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 USP37Q86T82 979 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 SYCP3Q8IZU3 236 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 STRA6Q9BX79 667 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 KCNH6Q9H252 994 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 MFSD1Q9H3U5 465 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 TIMM13Q9Y5L4 95 aaPredicted RBP20.14■□□□□ 0.81
CAPN1-203ENST00000525013 STYXL1Q9Y6J8 313 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 SCN1AP35498 2009 aa20.14■□□□□ 0.81
CAPN1-203ENST00000525013 ABLIM3O94929 683 aa20.13■□□□□ 0.81
CAPN1-203ENST00000525013 LRG1P02750 347 aa20.13■□□□□ 0.81
CAPN1-203ENST00000525013 CASP5P51878 434 aa20.13■□□□□ 0.81
CAPN1-203ENST00000525013 VCPP55072 806 aaKnown RBP20.13■□□□□ 0.81
CAPN1-203ENST00000525013 IER5LQ5T953 404 aa20.13■□□□□ 0.81
CAPN1-203ENST00000525013 CCDC65Q8IXS2 484 aa20.13■□□□□ 0.81
CAPN1-203ENST00000525013 ST13P5Q8NFI4 369 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-203ENST00000525013 DHX58Q96C10 678 aa20.13■□□□□ 0.81
CAPN1-203ENST00000525013 LRRC27Q9C0I9 530 aa20.13■□□□□ 0.81
CAPN1-203ENST00000525013 ASB7Q9H672 318 aa20.13■□□□□ 0.81
CAPN1-203ENST00000525013 CYP4F11Q9HBI6 524 aa20.13■□□□□ 0.81
CAPN1-203ENST00000525013 OLFML3Q9NRN5 406 aa20.13■□□□□ 0.81
CAPN1-203ENST00000525013 HCFC1R1Q9NWW0 138 aa20.13■□□□□ 0.81
CAPN1-203ENST00000525013 FBXL21Q9UKT6 434 aa20.13■□□□□ 0.81
CAPN1-203ENST00000525013 DUSP12Q9UNI6 340 aa20.13■□□□□ 0.81
CAPN1-203ENST00000525013 PIEZO1Q92508 2521 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 TCHHQ07283 1943 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 M0QZQ0 153 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 PPEF2O14830 753 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 POU2F2P09086 479 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 CPB1P15086 417 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 ATF2P15336 505 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 AVPR2P30518 371 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 ADSSP30520 456 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 ME1P48163 572 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 YWHAHQ04917 246 aaPredicted RBP20.12■□□□□ 0.81
CAPN1-203ENST00000525013 ALCAMQ13740 583 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 PKP1Q13835 747 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 PABPC1LQ4VXU2 614 aaKnown RBP20.12■□□□□ 0.81
CAPN1-203ENST00000525013 TPGS2Q68CL5 300 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 IQUBQ8NA54 791 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 KCNG4Q8TDN1 519 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 TNMDQ9H2S6 317 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 CDH7Q9ULB5 785 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 DERAQ9Y315 318 aa20.12■□□□□ 0.81
CAPN1-203ENST00000525013 ZFP37Q9Y6Q3 630 aaPredicted RBP20.12■□□□□ 0.81
CAPN1-203ENST00000525013 FRMD3A2A2Y4 597 aa20.11■□□□□ 0.81
CAPN1-203ENST00000525013 NARSO43776 548 aaKnown RBP20.11■□□□□ 0.81
CAPN1-203ENST00000525013 LILRA4P59901 499 aa20.11■□□□□ 0.81
CAPN1-203ENST00000525013 AMPD3Q01432 767 aa20.11■□□□□ 0.81
CAPN1-203ENST00000525013 E2F4Q16254 413 aa20.11■□□□□ 0.81
CAPN1-203ENST00000525013 C9orf57Q5W0N0 161 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms