RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 UBALD2Q8IYN6 164 aa12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 STAMQ92783 540 aa12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 ASIC4Q96FT7 647 aa12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 MFSD14AQ96MC6 490 aa12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 ACCSQ96QU6 501 aa12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 MYADMQ96S97 322 aa12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 SMOC2Q9H3U7 446 aa12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 PANK4Q9NVE7 773 aa12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 AGO2Q9UKV8 859 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 GCNT3O95395 438 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 POU2F2P09086 479 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 HOXA9P31269 272 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 GBP2P32456 591 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 ACOT2P49753 483 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 CASP5P51878 434 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 ROR1Q01973 937 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 SPATA1Q5VX52 437 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 ADALQ6DHV7 355 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 JADE1Q6IE81 842 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 SLC8B1Q6J4K2 584 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 SLC7A14Q8TBB6 771 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 FAM212AQ96EL1 285 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 FGFBP2Q9BYJ0 223 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 TNMDQ9H2S6 317 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 CUEDC2Q9H467 287 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 OLFML3Q9NRN5 406 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 EPS15L1Q9UBC2 864 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 EXOC7Q9UPT5 735 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 ARIH1Q9Y4X5 557 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 M0QZQ0 153 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 CCL16O15467 120 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 NFICP08651 508 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 KCNA1Q09470 495 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 ALCAMQ13740 583 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 TMEM132DQ14C87 1099 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 POSTNQ15063 836 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 CTXN3Q4LDR2 81 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 ATL3Q6DD88 541 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 CCDC65Q8IXS2 484 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 BEST2Q8NFU1 509 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 KCNG4Q8TDN1 519 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 PBXIP1Q96AQ6 731 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 DHX58Q96C10 678 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 LRRC27Q9C0I9 530 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 KBTBD4Q9NVX7 518 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 FBXL5Q9UKA1 691 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 DERAQ9Y315 318 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 PCDHB13Q9Y5F0 798 aa12.13□□□□□ -0.47
TRAPPC4-204ENST00000524797 WDR27A2RRH5 827 aa12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 PPEF2O14830 753 aa12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 ABLIM3O94929 683 aa12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 ADSSP30520 456 aa12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 AARSP49588 968 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 NTHL1P78549 312 aa12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 POU5F1Q01860 360 aaKnown RBP12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 UVSSAQ2YD98 709 aa12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 ZNF280DQ6N043 979 aa12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 CRELD2Q6UXH1 353 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 RTL10Q7L3V2 364 aa12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 GET4Q7L5D6 327 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 GRASPQ7Z6J2 395 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 APPL2Q8NEU8 664 aa12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 POMGNT1Q8WZA1 660 aa12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 PCDHA7Q9UN72 937 aa12.12□□□□□ -0.47
TRAPPC4-204ENST00000524797 XYLBO75191 536 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 FSHRP23945 695 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 ARPP19P56211 112 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 DNM1Q05193 864 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 C9orf57Q5W0N0 161 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 FBXL6Q8N531 539 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 IQUBQ8NA54 791 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 ZNF461Q8TAF7 563 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 ASB7Q9H672 318 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 KCNK12Q9HB15 430 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 IGSF9Q9P2J2 1179 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 ARHGEF37A1IGU5 675 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 PRPF6O94906 941 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 GARTP22102 1010 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 PLA2G5P39877 138 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 TDGQ13569 410 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 RESP18Q5W5W9 173 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 CNNM4Q6P4Q7 775 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 DSTYKQ6XUX3 929 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 SYCP3Q8IZU3 236 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 ZSWIM2Q8NEG5 633 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 PKNOX2Q96KN3 472 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 C7orf25Q9BPX7 421 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 TRIM9Q9C026 710 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 RCOR1Q9UKL0 485 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 CFAP45Q9UL16 551 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 C2CD2Q9Y426 696 aa12.11□□□□□ -0.47
TRAPPC4-204ENST00000524797 ANO9A1A5B4 782 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 PIRO00625 290 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 IL18RAPO95256 599 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 SEC24AO95486 1093 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 PDGFBP01127 241 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 TYMPP19971 482 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 ELF1P32519 619 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 ME1P48163 572 aa12.1□□□□□ -0.47
TRAPPC4-204ENST00000524797 AMPD3Q01432 767 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms