RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 FBXL18Q96ME1 805 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 HEXIM2Q96MH2 286 aaKnown RBP12.55□□□□□ -0.4
PTPRK-216ENST00000524481 CXCL16Q9H2A7 254 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 ABHD16BQ9H3Z7 469 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 NOCTQ9UK39 431 aaKnown RBP12.55□□□□□ -0.4
PTPRK-216ENST00000524481 LAMA3Q16787 3333 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 TCRBV7S2A1N4TA0A589 114 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 O00370 1275 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 NPTXRO95502 500 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 PYGMP11217 842 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 CYP2C9P11712 490 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 POLR2BP30876 1174 aaKnown RBP12.55□□□□□ -0.4
PTPRK-216ENST00000524481 GGCXP38435 758 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 ZNF667Q5HYK9 610 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 GNASQ5JWF2 1037 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 ZNF606Q8WXB4 792 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 ATG4AQ8WYN0 398 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 CGRRF1Q99675 332 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 JPH2Q9BR39 696 aaPredicted RBP12.55□□□□□ -0.4
PTPRK-216ENST00000524481 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.55□□□□□ -0.41e-6■□□□□ 8.7
PTPRK-216ENST00000524481 CACNG4Q9UBN1 327 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 TLDC2A0PJX2 215 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 DCAF8L1A6NGE4 600 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 TLR3O15455 904 aaKnown RBP12.55□□□□□ -0.4
PTPRK-216ENST00000524481 PSMC4P43686 418 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 PLTPP55058 493 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 RTP1P59025 263 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 SNRPFP62306 86 aaKnown RBP12.55□□□□□ -0.4
PTPRK-216ENST00000524481 MTM1Q13496 603 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 SEL1L2Q5TEA6 688 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 RHOT2Q8IXI1 618 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 OR2W6PQ8NHA6 318 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 AP5M1Q9H0R1 490 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 SNTG2Q9NY99 539 aa12.55□□□□□ -0.4
PTPRK-216ENST00000524481 GOLGA6BA6NDN3 693 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 CLTAP09496 248 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 PTENP60484 403 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 DYNLT1P63172 113 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 ACAD10Q6JQN1 1059 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 TLK2Q86UE8 772 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 C18orf8Q96DM3 657 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 C2orf40Q9H1Z8 148 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 FLRT1Q9NZU1 646 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 PIN4Q9Y237 131 aaKnown RBP12.54□□□□□ -0.4
PTPRK-216ENST00000524481 GOLGA6L10A0A0M3HER8 536 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 ZEB2O60315 1214 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 C22orf31O95567 290 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 KRT14P02533 472 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 PDGFRBP09619 1106 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 RPL7AP62424 266 aaKnown RBP12.54□□□□□ -0.4
PTPRK-216ENST00000524481 IFT122Q9HBG6 1241 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 ERVK-5Q9HDB9 667 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 FAM49BQ9NUQ9 324 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 SLC5A4Q9NY91 659 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 TJP2Q9UDY2 1190 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 PCSK1NQ9UHG2 260 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 SNX9Q9Y5X1 595 aa12.54□□□□□ -0.4
PTPRK-216ENST00000524481 TREHO43280 583 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 MCM3P25205 808 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 RGS7P49802 495 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 CDO1Q16878 200 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 SMTNL2Q2TAL5 461 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 OLFML2BQ68BL8 750 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 MTHFD1LQ6UB35 978 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 CXCL17Q6UXB2 119 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 B4GALNT4Q76KP1 1039 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 FMNL3Q8IVF7 1028 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 BRSK2Q8IWQ3 736 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 EMC1Q8N766 993 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 AFAP1L1Q8TED9 768 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 CASKIN2Q8WXE0 1202 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 PBKQ96KB5 322 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 ARHGAP39Q9C0H5 1083 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 ACBD3Q9H3P7 528 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 PRLRP16471 622 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 RFX1P22670 979 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 YARSP54577 528 aaKnown RBP12.53□□□□□ -0.4
PTPRK-216ENST00000524481 PPP1R7Q15435 360 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 KCNT1Q5JUK3 1230 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 LIN9Q5TKA1 542 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 ZPBP2Q6X784 338 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 PRUNE1Q86TP1 453 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 C12orf29Q8N999 325 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 ACAP3Q96P50 834 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 LPIN3Q9BQK8 851 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 C16orf70Q9BSU1 422 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 TMEM134Q9H6X4 195 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 SMYD3Q9H7B4 428 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 ZWILCHQ9H900 591 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 RAB21Q9UL25 225 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 DIS3Q9Y2L1 958 aaKnown RBP12.53□□□□□ -0.4
PTPRK-216ENST00000524481 CNTNAP2Q9UHC6 1331 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 MBTD1Q05BQ5 628 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 SGSM1Q2NKQ1 1148 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 DCAF12L1Q5VU92 463 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 MCEEQ96PE7 176 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 VTA1Q9NP79 307 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 COQ4Q9Y3A0 265 aa12.53□□□□□ -0.4
PTPRK-216ENST00000524481 HTTP42858 3142 aa12.52□□□□□ -0.4
PTPRK-216ENST00000524481 SBF1O95248 1867 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms