RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	MORC1	Q86VD1	984 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	SPATS2	Q86XZ4	545 aa	Known RBP	5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	CAGE1	Q8TC20	777 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	DDX17	Q92841	729 aa	Known RBP	5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	PTPRN2	Q92932	1015 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	DYDC2	Q96IM9	177 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	ADAM2	Q99965	735 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	PDCD2L	Q9BRP1	358 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	SARG	Q9BW04	601 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	LSM14B	Q9BX40	385 aa	Known RBP	5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	ENKD1	Q9H0I2	346 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	ZHX3	Q9H4I2	956 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	SEMA4G	Q9NTN9	838 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	INTS7	Q9NVH2	962 aa	Known RBP	5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	POLR3B	Q9NW08	1133 aa	Predicted RBP	5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	LUZP4	Q9P127	313 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	JCAD	Q9P266	1359 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	PZP	P20742	1482 aa		5.25	□□□□□ -1.57
PCM1-223	ENST00000524356	FAM135A	Q9P2D6	1515 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	MGST3	O14880	152 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	MTSS1	O43312	755 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	LDHC	P07864	332 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	C6orf222	P0C671	652 aa	Predicted RBP	5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	IDI1	Q13907	227 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	PCBP1	Q15365	356 aa	Known RBP eCLIP	5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	ANO1	Q5XXA6	986 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	ZNF772	Q68DY9	489 aa	Predicted RBP	5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	ZNF425	Q6IV72	752 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	ZNF280D	Q6N043	979 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	FAM43B	Q6ZT52	329 aa	Predicted RBP	5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	TPH2	Q8IWU9	490 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	PPM1K	Q8N3J5	372 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	CNTD1	Q8N815	330 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	CPEB3	Q8NE35	698 aa	Known RBP	5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	PJA1	Q8NG27	643 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	STRBP	Q96SI9	672 aa	Known RBP	5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	DUSP26	Q9BV47	211 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	ZNF70	Q9UC06	446 aa	Predicted RBP	5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	PCDHA9	Q9Y5H5	950 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	SETBP1	Q9Y6X0	1596 aa		5.24	□□□□□ -1.57
PCM1-223	ENST00000524356	AFF2	P51816	1311 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	PREX2	Q70Z35	1606 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	APAF1	O14727	1248 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	PIP5K1C	O60331	668 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	HSP90AA1	P07900	732 aa	Known RBP	5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	MYL3	P08590	195 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	TMPRSS15	P98073	1019 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	SLC6A3	Q01959	620 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	MPP3	Q13368	585 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	PICALM	Q13492	652 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	GALE	Q14376	348 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	DHCR24	Q15392	516 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	MEX3C	Q5U5Q3	659 aa	Known RBP	5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	ABHD17B	Q5VST6	288 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	SYDE2	Q5VT97	1194 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	CXorf57	Q6NSI4	855 aa	Known RBP	5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	ARHGEF25	Q86VW2	580 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	VPS37A	Q8NEZ2	397 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	DCLRE1C	Q96SD1	692 aa	Known RBP	5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	DHRS4	Q9BTZ2	278 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	MRPL4	Q9BYD3	311 aa	Known RBP	5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	PUS7L	Q9H0K6	701 aa	Known RBP	5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	KCMF1	Q9P0J7	381 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	IP6K2	Q9UHH9	426 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	PPP2R3B	Q9Y5P8	575 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	CDC42BPA	Q5VT25	1732 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	DEPDC5	O75140	1603 aa		5.23	□□□□□ -1.57
PCM1-223	ENST00000524356	NLRP1	Q9C000	1473 aa		5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	CCNB3	Q8WWL7	1395 aa		5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	EGR2	P11161	476 aa	Predicted RBP	5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	BLOC1S1	P78537	153 aa		5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	SRSF4	Q08170	494 aa	Known RBP	5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	ZNF460	Q14592	562 aa		5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	ABCB5	Q2M3G0	1257 aa		5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	CRELD2	Q6UXH1	353 aa	Predicted RBP	5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	SLC44A3	Q8N4M1	653 aa		5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	ANKRD42	Q8N9B4	389 aa		5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	TEX19	Q8NA77	164 aa		5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	GLB1L3	Q8NCI6	653 aa	Predicted RBP	5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	SLC9A6	Q92581	669 aa		5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	NAP1L5	Q96NT1	182 aa	Predicted RBP	5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	KIAA1586	Q9HCI6	787 aa		5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	TRIM39	Q9HCM9	518 aa		5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	PRDM11	Q9NQV5	511 aa		5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	POLR1A	O95602	1720 aa	Predicted RBP	5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	MAP3K1	Q13233	1512 aa		5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	CASKIN1	Q8WXD9	1431 aa		5.22	□□□□□ -1.57
PCM1-223	ENST00000524356	IQGAP1	P46940	1657 aa		5.21	□□□□□ -1.57
PCM1-223	ENST00000524356	ZC3H13	Q5T200	1668 aa	Known RBP	5.21	□□□□□ -1.57
PCM1-223	ENST00000524356	ROBO1	Q9Y6N7	1651 aa		5.21	□□□□□ -1.57
PCM1-223	ENST00000524356	INO80	Q9ULG1	1556 aa	Predicted RBP	5.21	□□□□□ -1.57
PCM1-223	ENST00000524356	SCAF11	Q99590	1463 aa	Known RBP	5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	ARHGAP23	Q9P227	1491 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	TRBV23-1	A0A0A0MS06	115 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	DAPK3	O43293	454 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	TIMM44	O43615	452 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	NBN	O60934	754 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	SPDEF	O95238	335 aa		5.21	□□□□□ -1.58
PCM1-223	ENST00000524356	POU3F2	P20265	443 aa	Predicted RBP	5.21	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms