RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 GRXCR2A6NFK2 248 aa12.96□□□□□ -0.33
CLN8-207ENST00000524258 M0QZQ0 153 aa12.96□□□□□ -0.33
CLN8-207ENST00000524258 C2CD2LO14523 706 aa12.96□□□□□ -0.33
CLN8-207ENST00000524258 C1RP00736 705 aa12.96□□□□□ -0.33
CLN8-207ENST00000524258 URODP06132 367 aa12.96□□□□□ -0.33
CLN8-207ENST00000524258 EPCAMP16422 314 aa12.96□□□□□ -0.33
CLN8-207ENST00000524258 RPL17P18621 184 aaKnown RBP12.96□□□□□ -0.33
CLN8-207ENST00000524258 TKTP29401 623 aaKnown RBP12.96□□□□□ -0.33
CLN8-207ENST00000524258 ELAVL2Q12926 359 aaKnown RBP12.96□□□□□ -0.33
CLN8-207ENST00000524258 NFIL3Q16649 462 aa12.96□□□□□ -0.33
CLN8-207ENST00000524258 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.96□□□□□ -0.33
CLN8-207ENST00000524258 NT5DC4Q86YG4 428 aa12.96□□□□□ -0.33
CLN8-207ENST00000524258 SMYD4Q8IYR2 804 aaPredicted RBP12.96□□□□□ -0.33
CLN8-207ENST00000524258 C1orf127Q8N9H9 656 aa12.96□□□□□ -0.33
CLN8-207ENST00000524258 SMRP1Q8NCR6 262 aa12.96□□□□□ -0.33
CLN8-207ENST00000524258 RIN2Q8WYP3 895 aaPredicted RBP12.96□□□□□ -0.33
CLN8-207ENST00000524258 PPP2R3CQ969Q6 453 aa12.96□□□□□ -0.33
CLN8-207ENST00000524258 FAM212AQ96EL1 285 aa12.96□□□□□ -0.33
CLN8-207ENST00000524258 RBAKQ9NYW8 714 aaPredicted RBP12.96□□□□□ -0.33
CLN8-207ENST00000524258 SIX4Q9UIU6 781 aa12.96□□□□□ -0.33
CLN8-207ENST00000524258 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.96□□□□□ -0.33
CLN8-207ENST00000524258 MUC3AQ02505 3323 aa12.96□□□□□ -0.34
CLN8-207ENST00000524258 ZNF233A6NK53 670 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 PRCPP42785 496 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 CASP4P49662 377 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 CYP2J2P51589 502 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 LILRA4P59901 499 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 CYP24A1Q07973 514 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 MYBPC2Q14324 1141 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 PSMD6Q15008 389 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 SNRNP35Q16560 246 aaKnown RBP12.95□□□□□ -0.34
CLN8-207ENST00000524258 ANKRD54Q6NXT1 300 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 HS2ST1Q7LGA3 356 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 XXYLT1Q8NBI6 393 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 BEST2Q8NFU1 509 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 OR5B17Q8NGF7 314 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 SUSD6Q92537 303 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 ZNF516Q92618 1163 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 KIAA1586Q9HCI6 787 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 DPP3Q9NY33 737 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 MTRRQ9UBK8 725 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 MAN1B1Q9UKM7 699 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 MAPK8IP1Q9UQF2 711 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 SSX2IPQ9Y2D8 614 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 BACE2Q9Y5Z0 518 aa12.95□□□□□ -0.34
CLN8-207ENST00000524258 FSD2A1L4K1 749 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 SYN3O14994 580 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 MBTPS2O43462 519 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 XPOTO43592 962 aaKnown RBP12.94□□□□□ -0.34
CLN8-207ENST00000524258 CD44P16070 742 aaKnown RBP12.94□□□□□ -0.34
CLN8-207ENST00000524258 CLDN10P78369 228 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 BMS1Q14692 1282 aaKnown RBP12.94□□□□□ -0.34
CLN8-207ENST00000524258 TJAP1Q5JTD0 557 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 C1orf220Q5T0J3 134 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 ZNF658Q5TYW1 1059 aaPredicted RBP12.94□□□□□ -0.34
CLN8-207ENST00000524258 CENPPQ6IPU0 288 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 LLGL2Q6P1M3 1020 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 ZC3H3Q8IXZ2 948 aaKnown RBP12.94□□□□□ -0.34
CLN8-207ENST00000524258 ADSSL1Q8N142 457 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 RDH13Q8NBN7 331 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 GOLGA5Q8TBA6 731 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 EMILIN2Q9BXX0 1053 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.94□□□□□ -0.34
CLN8-207ENST00000524258 INTS13Q9NVM9 706 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 PCDHB8Q9UN66 801 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 SCN1AP35498 2009 aa12.94□□□□□ -0.34
CLN8-207ENST00000524258 TRAPPC3O43617 180 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 KINO60870 393 aaKnown RBP12.93□□□□□ -0.34
CLN8-207ENST00000524258 OAZ2O95190 189 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 NR3C1P04150 777 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 KLRC2P26717 231 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 NDUFV1P49821 464 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 PMS1P54277 932 aaKnown RBP12.93□□□□□ -0.34
CLN8-207ENST00000524258 RAB33AQ14088 237 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 MORC3Q14149 939 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 CLUL1Q15846 466 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 PSMD5Q16401 504 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 VARS2Q5ST30 1063 aaKnown RBP12.93□□□□□ -0.34
CLN8-207ENST00000524258 LMBRD2Q68DH5 695 aaPredicted RBP12.93□□□□□ -0.34
CLN8-207ENST00000524258 SLC8B1Q6J4K2 584 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 KIAA1841Q6NSI8 718 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 LIMS2Q7Z4I7 341 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 PPFIBP1Q86W92 1011 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 CEP57Q86XR8 500 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 PARD3BQ8TEW8 1205 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 CASP10Q92851 521 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 SMARCE1Q969G3 411 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 SENP8Q96LD8 212 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 POP1Q99575 1024 aaKnown RBP12.93□□□□□ -0.34
CLN8-207ENST00000524258 CD207Q9UJ71 328 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 CDH22Q9UJ99 828 aa12.93□□□□□ -0.34
CLN8-207ENST00000524258 PPP1R3GB7ZBB8 358 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 TGM5O43548 720 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 AKAP3O75969 853 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 SMC2O95347 1197 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 CYP11A1P05108 521 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 ADH1AP07327 375 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 IL9P15248 144 aa12.92□□□□□ -0.34
CLN8-207ENST00000524258 HOXB8P17481 243 aaPredicted RBP12.92□□□□□ -0.34
CLN8-207ENST00000524258 TYMPP19971 482 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms