RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 DPP3Q9NY33 737 aa13.59□□□□□ -0.23
VEGFA-225ENST00000523950 GOLGA6L22H0YM25 854 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 PIRO00625 290 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 MAPK13O15264 365 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 TEX28O15482 410 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 LINC01565O15544 149 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 EXOC3O60645 756 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 NR3C1P04150 777 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 TMEM191BP0C7N4 346 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 RPL13P26373 211 aaKnown RBP13.58□□□□□ -0.24
VEGFA-225ENST00000523950 KLRC2P26717 231 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 PNPLA4P41247 253 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 BRCC3P46736 316 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 CYP2J2P51589 502 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 PSMD6Q15008 389 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 PSMD5Q16401 504 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 EDRF1Q3B7T1 1238 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 TJAP1Q5JTD0 557 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 EP400NLQ6ZTU2 488 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 CEP57Q86XR8 500 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 WDR49Q8IV35 697 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 ZSWIM2Q8NEG5 633 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 LNX1Q8TBB1 728 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-225ENST00000523950 NOC3LQ8WTT2 800 aaKnown RBP13.58□□□□□ -0.24
VEGFA-225ENST00000523950 SLC22A17Q8WUG5 538 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 HDAC7Q8WUI4 952 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 ANKRD36BP1Q96IX9 119 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 ZNF560Q96MR9 790 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 OXCT2Q9BYC2 517 aaPredicted RBP13.58□□□□□ -0.24
VEGFA-225ENST00000523950 DMAC2Q9NW81 257 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 MTRRQ9UBK8 725 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 CD207Q9UJ71 328 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 ITGA11Q9UKX5 1188 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 PCDHB8Q9UN66 801 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 BACE2Q9Y5Z0 518 aa13.58□□□□□ -0.24
VEGFA-225ENST00000523950 MTCL1Q9Y4B5 1905 aaKnown RBP13.58□□□□□ -0.24
VEGFA-225ENST00000523950 PLXNA3P51805 1871 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 H7C4K7 107 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 M0QZQ0 153 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 TAF6P49848 677 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 CLCN4P51793 760 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 TFAMQ00059 246 aaKnown RBP13.57□□□□□ -0.24
VEGFA-225ENST00000523950 TFF2Q03403 129 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 ENPEPQ07075 957 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 CYP24A1Q07973 514 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 SMAD4Q13485 552 aaKnown RBP13.57□□□□□ -0.24
VEGFA-225ENST00000523950 STIM1Q13586 685 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 DUOXA2Q1HG44 320 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 ANKRD54Q6NXT1 300 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 USP37Q86T82 979 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 LRRC52Q8N7C0 313 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 TRIML1Q8N9V2 468 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 VN1R2Q8NFZ6 395 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 MFSD14AQ96MC6 490 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 FNBP1Q96RU3 617 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 PDE11AQ9HCR9 933 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 INTS13Q9NVM9 706 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 CLEC1BQ9P126 229 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 FRMD4BQ9Y2L6 1034 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 EYSQ5T1H1 3165 aa13.57□□□□□ -0.24
VEGFA-225ENST00000523950 TSC2P49815 1807 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 H3BQ06 376 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-225ENST00000523950 GLUD1P00367 558 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 TNNC2P02585 160 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 ODC1P11926 461 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 TYMPP19971 482 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 NR2F2P24468 414 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 TKTP29401 623 aaKnown RBP13.56□□□□□ -0.24
VEGFA-225ENST00000523950 GUCY2FP51841 1108 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 AP3M2P53677 418 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 WNT7BP56706 349 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 LILRA4P59901 499 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 DLX2Q07687 328 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-225ENST00000523950 MRPL58Q14197 206 aaKnown RBP13.56□□□□□ -0.24
VEGFA-225ENST00000523950 SV2CQ496J9 727 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 ZCWPW2Q504Y3 356 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 VARS2Q5ST30 1063 aaKnown RBP13.56□□□□□ -0.24
VEGFA-225ENST00000523950 LLGL2Q6P1M3 1020 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 DSTYKQ6XUX3 929 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 C1orf127Q8N9H9 656 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 RDH13Q8NBN7 331 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 SMRP1Q8NCR6 262 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-225ENST00000523950 B3GALT6Q96L58 329 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 CGRRF1Q99675 332 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 TSG101Q99816 390 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 PLEKHA4Q9H4M7 779 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 MAN1B1Q9UKM7 699 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 DSEQ9UL01 958 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 BARX2Q9UMQ3 279 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-225ENST00000523950 MAPK8IP1Q9UQF2 711 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 R3HCC1Q9Y3T6 440 aaKnown RBP13.56□□□□□ -0.24
VEGFA-225ENST00000523950 SCN1AP35498 2009 aa13.56□□□□□ -0.24
VEGFA-225ENST00000523950 GRXCR2A6NFK2 248 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 I3L4J1 428 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 PSMA7O14818 248 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 MBTPS2O43462 519 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 ITGB3P05106 788 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 TNNI1P19237 187 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 IGFBP6P24592 240 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms