RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 ZNF516Q92618 1163 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 TSPAN18Q96SJ8 248 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 CGRRF1Q99675 332 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 TLE6Q9H808 572 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 NGRNQ9NPE2 291 aaKnown RBP13.87□□□□□ -0.19
VEGFA-224ENST00000523873 INTS13Q9NVM9 706 aa13.87□□□□□ -0.19
VEGFA-224ENST00000523873 ANO9A1A5B4 782 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 LRRIQ3A6PVS8 624 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-224ENST00000523873 PSMA7O14818 248 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 LILRB3O75022 631 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 CLASP2O75122 1294 aaKnown RBP13.86□□□□□ -0.19
VEGFA-224ENST00000523873 MBD3O95983 291 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 KRT19P08727 400 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 TNNI1P19237 187 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 DSG1Q02413 1049 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 STIM1Q13586 685 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 SURF1Q15526 300 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 NFIL3Q16649 462 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 DUSP6Q16828 381 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 EDRF1Q3B7T1 1238 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 USP41Q3LFD5 358 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 PDE12Q6L8Q7 609 aaKnown RBP13.86□□□□□ -0.19
VEGFA-224ENST00000523873 LLGL2Q6P1M3 1020 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 NT5DC4Q86YG4 428 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 WDR49Q8IV35 697 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 CSGALNACT2Q8N6G5 542 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 VN1R2Q8NFZ6 395 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 DHTKD1Q96HY7 919 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-224ENST00000523873 ANKRD36BP1Q96IX9 119 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 KLHL5Q96PQ7 755 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 FNBP1Q96RU3 617 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 TSG101Q99816 390 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 MRPL17Q9NRX2 175 aaKnown RBP13.86□□□□□ -0.19
VEGFA-224ENST00000523873 CHST7Q9NS84 486 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 SIX4Q9UIU6 781 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 AGAP1Q9UPQ3 857 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 FRMD4BQ9Y2L6 1034 aa13.86□□□□□ -0.19
VEGFA-224ENST00000523873 TIMM13Q9Y5L4 95 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-224ENST00000523873 TNNC2P02585 160 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 CNPP09543 421 aaKnown RBP13.85□□□□□ -0.19
VEGFA-224ENST00000523873 TRIM49P0CI25 452 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 TRIM49CP0CI26 452 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 FGFR3P22607 806 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 RPL13P26373 211 aaKnown RBP13.85□□□□□ -0.19
VEGFA-224ENST00000523873 DLX2Q07687 328 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-224ENST00000523873 BFSP1Q12934 665 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 MYBPC2Q14324 1141 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 TTI2Q6NXR4 508 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 DSTYKQ6XUX3 929 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-224ENST00000523873 FAM186BQ8IYM0 893 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 CXorf38Q8TB03 319 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 LNX1Q8TBB1 728 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-224ENST00000523873 CACTINQ8WUQ7 758 aaKnown RBP13.85□□□□□ -0.19
VEGFA-224ENST00000523873 TMEM174Q8WUU8 243 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 SUSD3Q96L08 255 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 DUSP9Q99956 384 aaKnown RBP13.85□□□□□ -0.19
VEGFA-224ENST00000523873 TTPALQ9BTX7 342 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 GTPBP4Q9BZE4 634 aaKnown RBP13.85□□□□□ -0.19
VEGFA-224ENST00000523873 CLDND1Q9NY35 253 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 TMEM63CQ9P1W3 806 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 TRANK1O15050 2925 aa13.85□□□□□ -0.19
VEGFA-224ENST00000523873 CETN3O15182 167 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 TEX28O15482 410 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 ADAM12O43184 909 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 SLC34A2O95436 690 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 GLP2RO95838 553 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 PSMC2P35998 433 aaKnown RBP13.84□□□□□ -0.19
VEGFA-224ENST00000523873 AARSP49588 968 aaKnown RBP eCLIP13.84□□□□□ -0.191e-6■■■■□ 20.6
VEGFA-224ENST00000523873 TAF6P49848 677 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 VAMP7P51809 220 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 NLRP12P59046 1061 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 LILRA4P59901 499 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 ELAVL2Q12926 359 aaKnown RBP13.84□□□□□ -0.19
VEGFA-224ENST00000523873 PAK1Q13153 545 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 BMS1Q14692 1282 aaKnown RBP13.84□□□□□ -0.19
VEGFA-224ENST00000523873 PSMD5Q16401 504 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 DUOXA2Q1HG44 320 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 DPCR1Q3MIW9 517 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 VARS2Q5ST30 1063 aaKnown RBP13.84□□□□□ -0.19
VEGFA-224ENST00000523873 C1orf220Q5T0J3 134 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 RSPO2Q6UXX9 243 aaPredicted RBP13.84□□□□□ -0.19
VEGFA-224ENST00000523873 TRAPPC11Q7Z392 1133 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 ZC3H3Q8IXZ2 948 aaKnown RBP13.84□□□□□ -0.19
VEGFA-224ENST00000523873 PARD3BQ8TEW8 1205 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 PIK3R5Q8WYR1 880 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 PPP2R3CQ969Q6 453 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 ELMO3Q96BJ8 720 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 MED15Q96RN5 788 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 MMRN2Q9H8L6 949 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 BARX2Q9UMQ3 279 aaPredicted RBP13.84□□□□□ -0.19
VEGFA-224ENST00000523873 PCDHB8Q9UN66 801 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 IRAK3Q9Y616 596 aa13.84□□□□□ -0.19
VEGFA-224ENST00000523873 REV3LO60673 3130 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 M0QZQ0 153 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 TRAPPC3O43617 180 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 TBX10O75333 385 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 CST3P01034 146 aaPredicted RBP13.83□□□□□ -0.2
VEGFA-224ENST00000523873 EPCAMP16422 314 aa13.83□□□□□ -0.2
VEGFA-224ENST00000523873 KLRC2P26717 231 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms