RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 SPOUT1Q5T280 376 aaKnown RBP10.04□□□□□ -0.8
SDCBP-212ENST00000523483 TMEM270Q6UE05 265 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 ABHD8Q96I13 439 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 PAAF1Q9BRP4 392 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 GANQ9H2C0 597 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 APOBEC3GQ9HC16 384 aaKnown RBP10.04□□□□□ -0.8
SDCBP-212ENST00000523483 SIX2Q9NPC8 291 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 PCDHB4Q9Y5E5 795 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 TMCO5BA8MYB1 307 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 ENPP3O14638 875 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 PTGESO14684 152 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 P4HA2O15460 535 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 XPOTO43592 962 aaKnown RBP10.04□□□□□ -0.8
SDCBP-212ENST00000523483 AKR1B10O60218 316 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 ZC3H11AO75152 810 aaKnown RBP eCLIP10.04□□□□□ -0.8
SDCBP-212ENST00000523483 B3GAT3O94766 335 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 MFAP3P55082 362 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 TMEM199Q8N511 208 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 BADQ92934 168 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 HCSTQ9UBK5 93 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 SIX4Q9UIU6 781 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 PYCARDQ9ULZ3 195 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 C2CD2Q9Y426 696 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 CDH23Q9H251 3354 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 CYP26A1O43174 497 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 IGFBP6P24592 240 aaPredicted RBP10.04□□□□□ -0.8
SDCBP-212ENST00000523483 STAT1P42224 750 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 AP3M2P53677 418 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 RBP5P82980 135 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 MYO1EQ12965 1108 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 SGSM1Q2NKQ1 1148 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 LMO3Q8TAP4 145 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 TMEM174Q8WUU8 243 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 PLEKHA5Q9HAU0 1116 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 RGS18Q9NS28 235 aa10.04□□□□□ -0.8
SDCBP-212ENST00000523483 TIMM13Q9Y5L4 95 aaPredicted RBP10.04□□□□□ -0.8
SDCBP-212ENST00000523483 C9IYK1 514 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 IPO7O95373 1038 aaKnown RBP10.03□□□□□ -0.8
SDCBP-212ENST00000523483 TIMP1P01033 207 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 CD19P15391 556 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 OR1G1P47890 313 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 CLCNKBP51801 687 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 BCAR1P56945 870 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 DSC3Q14574 896 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 PDXDC1Q6P996 788 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 CCDC42Q96M95 316 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 KREMEN1Q96MU8 473 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 TTYH3Q9C0H2 523 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 TSPYL2Q9H2G4 693 aaPredicted RBP10.03□□□□□ -0.8
SDCBP-212ENST00000523483 PLCB1Q9NQ66 1216 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 SPTLC3Q9NUV7 552 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 CITO14578 2027 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 TRIP11Q15643 1979 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 MYO9BQ13459 2157 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 TBKBP1A7MCY6 615 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 NT5C1B-RDH14C9J2C7 533 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 CUL2Q13617 745 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 DNAAF5Q86Y56 855 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 CD302Q8IX05 232 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 BAP1Q92560 729 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 SMYD3Q9H7B4 428 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 CNTN3Q9P232 1028 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 SQORQ9Y6N5 450 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 SCN5AQ14524 2016 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 F8VZ95 297 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 F8W810 466 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 ASS1P00966 412 aaKnown RBP10.03□□□□□ -0.8
SDCBP-212ENST00000523483 SKIP12755 728 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 KCNJ6P48051 423 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 CYP27A1Q02318 531 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 C15orf39Q6ZRI6 1047 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 URGCPQ8TCY9 931 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 NIF3L1Q9GZT8 377 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 GIT1Q9Y2X7 761 aa10.03□□□□□ -0.8
SDCBP-212ENST00000523483 CLDN10P78369 228 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 C1orf53Q5VUE5 145 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 C9orf57Q5W0N0 161 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 TNS4Q8IZW8 715 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 LBHD1Q9BQE6 289 aaPredicted RBP10.02□□□□□ -0.81
SDCBP-212ENST00000523483 ZBED2Q9BTP6 218 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 STK33Q9BYT3 514 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 HAUS4Q9H6D7 363 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 ADAMTS1Q9UHI8 967 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 ITGA11Q9UKX5 1188 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 COQ4Q9Y3A0 265 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.02□□□□□ -0.81
SDCBP-212ENST00000523483 EIF4A3P38919 411 aaKnown RBP10.02□□□□□ -0.81
SDCBP-212ENST00000523483 NOMO2Q5JPE7 1267 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 CLLU1OSQ5K130 101 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 MFSD5Q6N075 450 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 CYP26C1Q6V0L0 522 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 DSTYKQ6XUX3 929 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 ZNF280BQ86YH2 543 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 GSTCDQ8NEC7 633 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 OR6B3Q8NGW1 331 aa10.02□□□□□ -0.81
SDCBP-212ENST00000523483 ZNF623O75123 536 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 PDGFRBP09619 1106 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 SOX5P35711 763 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 DEFB103AP81534 67 aa10.01□□□□□ -0.81
SDCBP-212ENST00000523483 CCZ1BP86790 482 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms