RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 HCFC1R1Q9NWW0 138 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 TBX20Q9UMR3 447 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 POLIQ9UNA4 740 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 SMC3Q9UQE7 1217 aa13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 MRPS23Q9Y3D9 190 aaKnown RBP13.79□□□□□ -0.2
TOP1MT-217ENST00000523417 A0A0B4J269 797 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 SEC24AO95486 1093 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 LRG1P02750 347 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 DDIT3P35638 169 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 MAGEA9P43362 315 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 EPHA5P54756 1037 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 GTF2BQ00403 316 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 ZRSR1Q15695 479 aaKnown RBP13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 CTXN3Q4LDR2 81 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 ZNF280DQ6N043 979 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 POTEHQ6S545 545 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 C1orf210Q8IVY1 113 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 LEMD2Q8NC56 503 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 PJA1Q8NG27 643 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 ELSPBP1Q96BH3 223 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 FIZ1Q96SL8 496 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 PLIN2Q99541 437 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 REEP2Q9BRK0 252 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 CCSER1Q9C0I3 900 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 UPF2Q9HAU5 1272 aaKnown RBP13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 UBQLN1Q9UMX0 589 aaKnown RBP13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 STYXL1Q9Y6J8 313 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 VWA8A3KMH1 1905 aa13.78□□□□□ -0.2
TOP1MT-217ENST00000523417 NPHP3-ACAD11A0A0J9YXS1 232 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 OGTO15294 1046 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 XPOTO43592 962 aaKnown RBP13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 TRAK2O60296 914 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 MARCKSP29966 332 aaPredicted RBP13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 CUL4AQ13619 759 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 MLF2Q15773 248 aaPredicted RBP13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 SLC5A9Q2M3M2 681 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 ZNF528Q3MIS6 628 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 SEZ6Q53EL9 994 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 MAMSTRQ6ZN01 415 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 LRRC15Q8TF66 581 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 CLDN23Q96B33 292 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 TRPV4Q9HBA0 871 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 PARVGQ9HBI0 331 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 CYP4F11Q9HBI6 524 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 TRPV5Q9NQA5 729 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 ANKFY1Q9P2R3 1169 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 DERAQ9Y315 318 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 INSL5Q9Y5Q6 135 aa13.77□□□□□ -0.21
TOP1MT-217ENST00000523417 DOCK6Q96HP0 2047 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 LACTBL1A8MY62 500 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 PRRG1O14668 218 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 DCNP07585 359 aaKnown RBP13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 CXCL8P10145 99 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 GLULP15104 373 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 TYMPP19971 482 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 RFX1P22670 979 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 MCM4P33991 863 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 GPR17Q13304 367 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 SNW1Q13573 536 aaKnown RBP13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 CYP4A22Q5TCH4 519 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 SPATA1Q5VX52 437 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 TANGO2Q6ICL3 276 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 GPBP1Q86WP2 473 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 MYCT1Q8N699 235 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 RAD54LQ92698 747 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 MCRS1Q96EZ8 462 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 KIF12Q96FN5 646 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 ZNF512Q96ME7 567 aaPredicted RBP13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 GPR88Q9GZN0 384 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 CEP72Q9P209 647 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 HSFX1Q9UBD0 423 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 TUBGCP4Q9UGJ1 667 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 CPSF3Q9UKF6 684 aaKnown RBP13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 MORC2Q9Y6X9 1032 aaPredicted RBP13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 FAM186AA6NE01 2351 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 NOTCH4Q99466 2003 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 USP34Q70CQ2 3546 aa13.76□□□□□ -0.21
TOP1MT-217ENST00000523417 OR6C75A6NL08 312 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 MOSPD3O75425 235 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 SP9P0CG40 484 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 HARSP12081 509 aaKnown RBP13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 FCARP24071 287 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 TNFSF9P41273 254 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 RPS9P46781 194 aaKnown RBP13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 LIG4P49917 911 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 MLLT6P55198 1093 aaPredicted RBP13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 CACNB1Q02641 598 aaPredicted RBP13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 PPP2R3AQ06190 1150 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 ADCY1Q08828 1119 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 MYBPC2Q14324 1141 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 MCM6Q14566 821 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 SF3A1Q15459 793 aaKnown RBP13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 ENOX2Q16206 610 aaKnown RBP13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 SLFN12LQ6IEE8 588 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 IQCEQ6IPM2 695 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 RNF19BQ6ZMZ0 732 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 MAP4K3Q8IVH8 894 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 MAML2Q8IZL2 1156 aaPredicted RBP13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 DNASE1L2Q92874 299 aa13.75□□□□□ -0.21
TOP1MT-217ENST00000523417 CORO1BQ9BR76 489 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms