RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 RDH13Q8NBN7 331 aa11.4□□□□□ -0.58
DENND3-220ENST00000523066 LNX1Q8TBB1 728 aaPredicted RBP11.4□□□□□ -0.58
DENND3-220ENST00000523066 CDCA3Q99618 268 aaPredicted RBP11.4□□□□□ -0.58
DENND3-220ENST00000523066 COL25A1Q9BXS0 654 aaPredicted RBP11.4□□□□□ -0.58
DENND3-220ENST00000523066 PDE11AQ9HCR9 933 aa11.4□□□□□ -0.58
DENND3-220ENST00000523066 HSPBP1Q9NZL4 362 aa11.4□□□□□ -0.58
DENND3-220ENST00000523066 CD207Q9UJ71 328 aa11.4□□□□□ -0.58
DENND3-220ENST00000523066 UBQLN1Q9UMX0 589 aaKnown RBP11.4□□□□□ -0.58
DENND3-220ENST00000523066 UNC80Q8N2C7 3258 aa11.4□□□□□ -0.58
DENND3-220ENST00000523066 DOCK6Q96HP0 2047 aa11.4□□□□□ -0.59
DENND3-220ENST00000523066 TSC2P49815 1807 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 UBE4BO95155 1302 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 PTPRJQ12913 1337 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 SPTLC1O15269 473 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 NCK2O43639 380 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 EXTL3O43909 919 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 RHOBTB3O94955 611 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 WEE2P0C1S8 567 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 FGFR3P22607 806 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 LRPAP1P30533 357 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 MCM4P33991 863 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 CLCN4P51793 760 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 BMS1Q14692 1282 aaKnown RBP11.39□□□□□ -0.59
DENND3-220ENST00000523066 KNOP1Q1ED39 458 aaKnown RBP11.39□□□□□ -0.59
DENND3-220ENST00000523066 AAK1Q2M2I8 961 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 ANKRD54Q6NXT1 300 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 RSPO2Q6UXX9 243 aaPredicted RBP11.39□□□□□ -0.59
DENND3-220ENST00000523066 TMEM87AQ8NBN3 555 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 ADAMTS19Q8TE59 1207 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 CLSTN3Q9BQT9 956 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 TTPALQ9BTX7 342 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 EMILIN2Q9BXX0 1053 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 KCTD10Q9H3F6 313 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 RXFP1Q9HBX9 757 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 RBAKQ9NYW8 714 aaPredicted RBP11.39□□□□□ -0.59
DENND3-220ENST00000523066 NUB1Q9Y5A7 615 aa11.39□□□□□ -0.59
DENND3-220ENST00000523066 TIMM13Q9Y5L4 95 aaPredicted RBP11.39□□□□□ -0.59
DENND3-220ENST00000523066 PRPF40AO75400 957 aaKnown RBP11.38□□□□□ -0.59
DENND3-220ENST00000523066 LDHAP00338 332 aaKnown RBP11.38□□□□□ -0.59
DENND3-220ENST00000523066 MYL1P05976 194 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 CYP3A5P20815 502 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 RPL9P32969 192 aaKnown RBP11.38□□□□□ -0.59
DENND3-220ENST00000523066 TFAMQ00059 246 aaKnown RBP11.38□□□□□ -0.59
DENND3-220ENST00000523066 PSMD2Q13200 908 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 PSMD5Q16401 504 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 RARS2Q5T160 578 aaKnown RBP11.38□□□□□ -0.59
DENND3-220ENST00000523066 C9orf57Q5W0N0 161 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 ISM2Q6H9L7 571 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 TMEM184AQ6ZMB5 413 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.38□□□□□ -0.59
DENND3-220ENST00000523066 CD302Q8IX05 232 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 SMRP1Q8NCR6 262 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 BEST2Q8NFU1 509 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 PIK3R5Q8WYR1 880 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 S1PR5Q9H228 398 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 OCEL1Q9H607 264 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 ASB7Q9H672 318 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 DPP3Q9NY33 737 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 PCDHA5Q9Y5H7 936 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 XIRP2A4UGR9 3374 aa11.38□□□□□ -0.59
DENND3-220ENST00000523066 ANO9A1A5B4 782 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 PIRO00625 290 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 TGM5O43548 720 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 IL18RAPO95256 599 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 CASP4P49662 377 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 ELAVL2Q12926 359 aaKnown RBP11.37□□□□□ -0.59
DENND3-220ENST00000523066 KCNB1Q14721 858 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 VARS2Q5ST30 1063 aaKnown RBP11.37□□□□□ -0.59
DENND3-220ENST00000523066 POTEHQ6S545 545 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 OR5B17Q8NGF7 314 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 PLEKHO2Q8TD55 490 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 CASP10Q92851 521 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 SUSD3Q96L08 255 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 FBXL18Q96ME1 805 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 IPO9Q96P70 1041 aaKnown RBP11.37□□□□□ -0.59
DENND3-220ENST00000523066 POP1Q99575 1024 aaKnown RBP11.37□□□□□ -0.59
DENND3-220ENST00000523066 GZF1Q9H116 711 aaPredicted RBP11.37□□□□□ -0.59
DENND3-220ENST00000523066 CD320Q9NPF0 282 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 MAN1C1Q9NR34 630 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 STK39Q9UEW8 545 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 SSX2IPQ9Y2D8 614 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 DERAQ9Y315 318 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 C2CD2Q9Y426 696 aa11.37□□□□□ -0.59
DENND3-220ENST00000523066 USP15Q9Y4E8 981 aaPredicted RBP11.37□□□□□ -0.59
DENND3-220ENST00000523066 ZNF233A6NK53 670 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 XPOTO43592 962 aaKnown RBP11.36□□□□□ -0.59
DENND3-220ENST00000523066 RFPL2O75678 378 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 ITGB3P05106 788 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 ADH1AP07327 375 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 OR1D2P34982 312 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 CDR1P51861 262 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 ARPP19P56211 112 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 SMAD4Q13485 552 aaKnown RBP11.36□□□□□ -0.59
DENND3-220ENST00000523066 SNRNP35Q16560 246 aaKnown RBP11.36□□□□□ -0.59
DENND3-220ENST00000523066 LILRA6Q6PI73 481 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 TMC5Q6UXY8 1006 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 DSTYKQ6XUX3 929 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 HS2ST1Q7LGA3 356 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 C1orf127Q8N9H9 656 aa11.36□□□□□ -0.59
DENND3-220ENST00000523066 XXYLT1Q8NBI6 393 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms