RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 PLA2G4BP0C869 781 aa16.84■□□□□ 0.29
MRPS28-209ENST00000522987 PLS3P13797 630 aa16.84■□□□□ 0.29
MRPS28-209ENST00000522987 ATF2P15336 505 aa16.84■□□□□ 0.29
MRPS28-209ENST00000522987 TARSP26639 723 aaKnown RBP16.84■□□□□ 0.29
MRPS28-209ENST00000522987 PRPHP41219 470 aa16.84■□□□□ 0.29
MRPS28-209ENST00000522987 CSTF1Q05048 431 aaKnown RBP16.84■□□□□ 0.29
MRPS28-209ENST00000522987 TWF1Q12792 350 aa16.84■□□□□ 0.29
MRPS28-209ENST00000522987 ZBTB41Q5SVQ8 909 aa16.84■□□□□ 0.29
MRPS28-209ENST00000522987 TSSK4Q6SA08 328 aa16.84■□□□□ 0.29
MRPS28-209ENST00000522987 RNF19BQ6ZMZ0 732 aa16.84■□□□□ 0.29
MRPS28-209ENST00000522987 DDX12PQ92771 950 aa16.84■□□□□ 0.29
MRPS28-209ENST00000522987 KIF12Q96FN5 646 aa16.84■□□□□ 0.29
MRPS28-209ENST00000522987 SUSD3Q96L08 255 aa16.84■□□□□ 0.29
MRPS28-209ENST00000522987 PGLYRP2Q96PD5 576 aa16.84■□□□□ 0.29
MRPS28-209ENST00000522987 NDRG2Q9UN36 371 aaKnown RBP16.84■□□□□ 0.29
MRPS28-209ENST00000522987 ZNF292O60281 2723 aa16.83■□□□□ 0.29
MRPS28-209ENST00000522987 LAD1O00515 517 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 SYN3O14994 580 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 LAMTOR5O43504 91 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 TBC1D4O60343 1298 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 TOM1L1O75674 476 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 CD2BP2O95400 341 aaKnown RBP16.83■□□□□ 0.28
MRPS28-209ENST00000522987 POU2F2P09086 479 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 MAPTP10636 758 aaKnown RBP16.83■□□□□ 0.28
MRPS28-209ENST00000522987 FCARP24071 287 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 GUCY2CP25092 1073 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 GJB2P29033 226 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 ATP2C1P98194 919 aaPredicted RBP16.83■□□□□ 0.28
MRPS28-209ENST00000522987 PFKPQ01813 784 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 PRKCQQ04759 706 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 MRPL58Q14197 206 aaKnown RBP16.83■□□□□ 0.28
MRPS28-209ENST00000522987 OTOGLQ3ZCN5 2332 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 FAM78AQ5JUQ0 283 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 PRSS36Q5K4E3 855 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 ZNF280DQ6N043 979 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 PDZD4Q76G19 769 aaPredicted RBP16.83■□□□□ 0.28
MRPS28-209ENST00000522987 SYT2Q8N9I0 419 aaPredicted RBP16.83■□□□□ 0.28
MRPS28-209ENST00000522987 FAM212AQ96EL1 285 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 ZSWIM3Q96MP5 696 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 DDX23Q9BUQ8 820 aaKnown RBP16.83■□□□□ 0.28
MRPS28-209ENST00000522987 CEP72Q9P209 647 aa16.83■□□□□ 0.28
MRPS28-209ENST00000522987 H3BQV1 296 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 PPEF2O14830 753 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 CLDN3O15551 220 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 ECI2O75521 394 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 MARCKSP29966 332 aaPredicted RBP16.82■□□□□ 0.28
MRPS28-209ENST00000522987 RPL9P32969 192 aaKnown RBP16.82■□□□□ 0.28
MRPS28-209ENST00000522987 VIPR2P41587 438 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 SMTNP53814 917 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 SLC12A3P55017 1021 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 ARSHQ5FYA8 562 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 ERICH6BQ5W0A0 696 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 ZC3H14Q6PJT7 736 aaKnown RBP16.82■□□□□ 0.28
MRPS28-209ENST00000522987 TCEAL8Q8IYN2 117 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 LRRC15Q8TF66 581 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 ZHX3Q9H4I2 956 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 BRD9Q9H8M2 597 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 GDE1Q9NZC3 331 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 F5P12259 2224 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 ATG2BQ96BY7 2078 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 RALGAPA1Q6GYQ0 2036 aa16.82■□□□□ 0.28
MRPS28-209ENST00000522987 NCANO14594 1321 aa16.81■□□□□ 0.28
MRPS28-209ENST00000522987 TULP1O00294 542 aaPredicted RBP16.81■□□□□ 0.28
MRPS28-209ENST00000522987 TEAD2Q15562 447 aa16.81■□□□□ 0.28
MRPS28-209ENST00000522987 RILPL1Q5EBL4 403 aa16.81■□□□□ 0.28
MRPS28-209ENST00000522987 HYIQ5T013 277 aa16.81■□□□□ 0.28
MRPS28-209ENST00000522987 CYP4A22Q5TCH4 519 aa16.81■□□□□ 0.28
MRPS28-209ENST00000522987 GPBP1Q86WP2 473 aa16.81■□□□□ 0.28
MRPS28-209ENST00000522987 ELMOD1Q8N336 334 aa16.81■□□□□ 0.28
MRPS28-209ENST00000522987 SPIRE2Q8WWL2 714 aa16.81■□□□□ 0.28
MRPS28-209ENST00000522987 RMDN1Q96DB5 314 aa16.81■□□□□ 0.28
MRPS28-209ENST00000522987 ZNF512Q96ME7 567 aaPredicted RBP16.81■□□□□ 0.28
MRPS28-209ENST00000522987 C17orf75Q9HAS0 396 aa16.81■□□□□ 0.28
MRPS28-209ENST00000522987 ZFP14Q9HCL3 533 aa16.81■□□□□ 0.28
MRPS28-209ENST00000522987 PCDHB8Q9UN66 801 aa16.81■□□□□ 0.28
MRPS28-209ENST00000522987 DMXL1Q9Y485 3027 aa16.81■□□□□ 0.28
MRPS28-209ENST00000522987 NUP210Q8TEM1 1887 aaPredicted RBP16.8■□□□□ 0.28
MRPS28-209ENST00000522987 SHISA7A6NL88 538 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 LACTBL1A8MY62 500 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 K7ENM7 598 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 KINO60870 393 aaKnown RBP16.8■□□□□ 0.28
MRPS28-209ENST00000522987 MOSPD3O75425 235 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 SOAT2O75908 522 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 GDI1P31150 447 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 LIG4P49917 911 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 MCL1Q07820 350 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 TMEM119Q4V9L6 283 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 IQCEQ6IPM2 695 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 DSTYKQ6XUX3 929 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 HAUS6Q7Z4H7 955 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 TTC9BQ8N6N2 239 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 APPL2Q8NEU8 664 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 ELSPBP1Q96BH3 223 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 TMX3Q96JJ7 454 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 REEP2Q9BRK0 252 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 NTPCRQ9BSD7 190 aaKnown RBP16.8■□□□□ 0.28
MRPS28-209ENST00000522987 TIPINQ9BVW5 301 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 CRISPLD1Q9H336 500 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 SEMA4AQ9H3S1 761 aa16.8■□□□□ 0.28
MRPS28-209ENST00000522987 SLITRK6Q9H5Y7 841 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms