RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 PTPN18Q99952 460 aa3.3□□□□□ -1.88
CKS1BP7-201ENST00000522230 VRK1Q99986 396 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP7-201ENST00000522230 OR10A2Q9H208 303 aa3.3□□□□□ -1.88
CKS1BP7-201ENST00000522230 BARX1Q9HBU1 254 aaPredicted RBP3.3□□□□□ -1.88
CKS1BP7-201ENST00000522230 C1orf112Q9NSG2 853 aa3.3□□□□□ -1.88
CKS1BP7-201ENST00000522230 TRPS1Q9UHF7 1281 aa3.3□□□□□ -1.88
CKS1BP7-201ENST00000522230 ADAM29Q9UKF5 820 aa3.3□□□□□ -1.88
CKS1BP7-201ENST00000522230 RUVBL1Q9Y265 456 aaKnown RBP3.3□□□□□ -1.88
CKS1BP7-201ENST00000522230 PCDHA3Q9Y5H8 950 aa3.3□□□□□ -1.88
CKS1BP7-201ENST00000522230 ACTL7AQ9Y615 435 aa3.3□□□□□ -1.88
CKS1BP7-201ENST00000522230 MST1RQ04912 1400 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 SBNO1A3KN83 1393 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 FLT4P35916 1363 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 AATKQ6ZMQ8 1374 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 PNPLA6Q8IY17 1366 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 MATN2O00339 956 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 PMM2O15305 246 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 KCNQ3O43525 872 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 B4GALT3O60512 393 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 B4GALT4O60513 344 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 ITGA10O75578 1167 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 TUSC2O75896 110 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 TSPAN15O95858 294 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 GCP02774 474 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 MYL1P05976 194 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 HTR1BP28222 390 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 PTPN7P35236 360 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 KIR2DL3P43628 341 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 RAP1GAPP47736 663 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 ZNF280AP59817 542 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 MAN2A1Q16706 1144 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 ZNF827Q17R98 1081 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 KHDC1Q4VXA5 237 aaKnown RBP3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 CCDC157Q569K6 752 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 MFSD14BQ5SR56 506 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 KRT40Q6A162 431 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 ZNF530Q6P9A1 599 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 NPNTQ6UXI9 565 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 CCDC149Q6ZUS6 474 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 USP30Q70CQ3 517 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 BRINP3Q76B58 766 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 RALYLQ86SE5 291 aaKnown RBP3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 ITPRIPQ8IWB1 547 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 WDR63Q8IWG1 891 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 REXO1L1PQ8IX06 675 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 KBTBD2Q8IY47 623 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 FTSJ3Q8IY81 847 aaKnown RBP3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 DRC7Q8IY82 874 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 LINC01356Q8N9X3 169 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 NSUN6Q8TEA1 469 aaKnown RBP3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 PARD3BQ8TEW8 1205 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 ZNF480Q8WV37 535 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 CFHR4Q92496 578 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 GFM2Q969S9 779 aaKnown RBP3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 SLC7A6OSQ96CW6 309 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 C1GALT1C1Q96EU7 318 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 CEP95Q96GE4 821 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 LCORQ96JN0 433 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 FAM193BQ96PV7 902 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 PPP1R16BQ96T49 567 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 SLC38A3Q99624 504 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 MYOCQ99972 504 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 DPYSL5Q9BPU6 564 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 SARGQ9BW04 601 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 SENP6Q9GZR1 1112 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 BHMT2Q9H2M3 363 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 AGO3Q9H9G7 860 aaKnown RBP3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 TDP1Q9NUW8 608 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 GPRC5DQ9NZD1 345 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 AJAP1Q9UKB5 411 aaPredicted RBP3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 NR2E1Q9Y466 385 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 NWD1Q149M9 1564 aa3.29□□□□□ -1.88
CKS1BP7-201ENST00000522230 RGPD2P0DJD1 1756 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 STRCQ7RTU9 1775 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 ARHGEF10O15013 1369 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 MARF1Q9Y4F3 1742 aaKnown RBP3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 MROH6A6NGR9 719 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 FAM171A2A8MVW0 826 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 H3BML4 177 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 ARHGAP6O43182 974 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 CNOT4O95628 575 aaKnown RBP3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 ANXA1P04083 346 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 SBK3P0C264 359 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 TRIM27P14373 513 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 RHCEP18577 417 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 EIF2S2P20042 333 aaKnown RBP3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 ALDH1A3P47895 512 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 PIP4K2AP48426 406 aaPredicted RBP3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 ADCY7P51828 1080 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 MEF2AQ02078 507 aaPredicted RBP3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 RHDQ02161 417 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 HGFACQ04756 655 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 DUSP2Q05923 314 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 NOGQ13253 232 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 UBE4AQ14139 1066 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 KIAA0753Q2KHM9 967 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 C19orf54Q5BKX5 351 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 FAM26FQ5R3K3 315 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 NT5DC1Q5TFE4 455 aa3.28□□□□□ -1.88
CKS1BP7-201ENST00000522230 CCSAPQ6IQ19 270 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms