RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 RALGPS2Q86X27 583 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 MFSD6LQ8IWD5 586 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 METTL13Q8N6R0 699 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 PNMA1Q8ND90 353 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 DEPDC1BQ8WUY9 529 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 CHFRQ96EP1 664 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 NUSAP1Q9BXS6 441 aaKnown RBP8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 PANK2Q9BZ23 570 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 GRPEL1Q9HAV7 217 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 IL21Q9HBE4 155 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 JPH1Q9HDC5 661 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 SNTG2Q9NY99 539 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 KIAA1522Q9P206 1035 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 SLC9A2Q9UBY0 812 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 EBF1Q9UH73 591 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 MTMR6Q9Y217 621 aa8.15□□□□□ -1.1
CTNNA1-227ENST00000521387 CABIN1Q9Y6J0 2220 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 BAZ2BQ9UIF8 2168 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 PCDH15Q96QU1 1955 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 FAM149AA5PLN7 773 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 HEPACAM2A8MVW5 462 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 GADD45BO75293 160 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 CCNE2O96020 404 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 F13A1P00488 732 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 PTGER3P43115 390 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 DHPSP49366 369 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 KPNA1P52294 538 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 ZNF445P59923 1031 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 EXOSC10Q01780 885 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 ANKRD1Q15327 319 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 USP41Q3LFD5 358 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 FUT10Q6P4F1 479 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 C1orf228Q6PIY5 440 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 USP17L6PQ6QN14 398 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 KRT25Q7Z3Z0 450 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 MRPL10Q7Z7H8 261 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 GLRX5Q86SX6 157 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 DGKHQ86XP1 1220 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 HDDC3Q8N4P3 179 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 LRRC71Q8N4P6 559 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 LNX1Q8TBB1 728 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 SMARCD2Q92925 531 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 LRRC2Q9BYS8 371 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 TRPV4Q9HBA0 871 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 GDPD2Q9HCC8 539 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 TOMM22Q9NS69 142 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 GTSE1Q9NYZ3 720 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 BOD1L1Q8NFC6 3051 aa8.14□□□□□ -1.11
CTNNA1-227ENST00000521387 CACNA1DQ01668 2161 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 TERTO14746 1132 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 MEIS2O14770 477 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 CHADO15335 359 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 OPHN1O60890 802 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 ZFYP08048 801 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 ADSSP30520 456 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 IL12RB1P42701 662 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 SLC26A2P50443 739 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 FCHO2Q0JRZ9 810 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 STK3Q13188 491 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 ITGB3BPQ13352 177 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 MTMR1Q13613 665 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 UVSSAQ2YD98 709 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 ZSCAN23Q3MJ62 389 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 TWF2Q6IBS0 349 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 ABHD15Q6UXT9 468 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 CCDC60Q8IWA6 550 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 MINDY1Q8N5J2 469 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 URGCPQ8TCY9 931 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 CSGALNACT1Q8TDX6 532 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 RABGGTAQ92696 567 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 CDHR1Q96JP9 859 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 ZFYVE19Q96K21 471 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 FAM193BQ96PV7 902 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 PIGSQ96S52 555 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 ARID3AQ99856 593 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 APOL6Q9BWW8 343 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 GTPBP2Q9BX10 602 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 CAPN10Q9HC96 672 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 FBRSL1Q9HCM7 1045 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 DNAAF2Q9NVR5 837 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 TMEM63CQ9P1W3 806 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 AKT3Q9Y243 479 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 PAXBP1Q9Y5B6 917 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 PCDHB2Q9Y5E7 798 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 LRBAP50851 2863 aa8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 TNRC6BQ9UPQ9 1833 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-227ENST00000521387 SPTBN1Q01082 2364 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 ATXN2Q99700 1313 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 E7EWF7 191 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 C3orf80F5H4A9 247 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 CYTH3O43739 400 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 PARP1P09874 1014 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 CR2P20023 1033 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 TLE3Q04726 772 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 DRP2Q13474 957 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 SERINC3Q13530 473 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 UBAP2LQ14157 1087 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 MAPK6Q16659 721 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 TMEM196Q5HYL7 178 aa8.12□□□□□ -1.11
CTNNA1-227ENST00000521387 UBXN11Q5T124 520 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms