RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 BRIX1Q8TDN6 353 aaKnown RBP6.49□□□□□ -1.37
SKP1-208ENST00000521216 MARS2Q96GW9 593 aaKnown RBP6.49□□□□□ -1.37
SKP1-208ENST00000521216 PLEKHG4BQ96PX9 1271 aa6.49□□□□□ -1.37
SKP1-208ENST00000521216 DCLRE1CQ96SD1 692 aaKnown RBP6.49□□□□□ -1.37
SKP1-208ENST00000521216 C1QTNF3Q9BXJ4 246 aa6.49□□□□□ -1.37
SKP1-208ENST00000521216 IMPG2Q9BZV3 1241 aa6.49□□□□□ -1.37
SKP1-208ENST00000521216 MRPL46Q9H2W6 279 aaKnown RBP6.49□□□□□ -1.37
SKP1-208ENST00000521216 SIDT1Q9NXL6 827 aaKnown RBP6.49□□□□□ -1.37
SKP1-208ENST00000521216 FAM30AQ9NZY2 134 aa6.49□□□□□ -1.37
SKP1-208ENST00000521216 CAPN8A6NHC0 703 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 A6NNZ2 444 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 FAM227AF5H4B4 570 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 RPS6KA4O75676 772 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 EXOSC9Q06265 439 aaKnown RBP6.48□□□□□ -1.37
SKP1-208ENST00000521216 TOB2Q14106 344 aaPredicted RBP6.48□□□□□ -1.37
SKP1-208ENST00000521216 GBX1Q14549 363 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 KIAA0753Q2KHM9 967 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 PDCD4Q53EL6 469 aaKnown RBP6.48□□□□□ -1.37
SKP1-208ENST00000521216 NOMO2Q5JPE7 1267 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 FAM102AQ5T9C2 384 aaPredicted RBP6.48□□□□□ -1.37
SKP1-208ENST00000521216 ZNF365Q70YC5 407 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 GDF7Q7Z4P5 450 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 COL23A1Q86Y22 540 aaPredicted RBP6.48□□□□□ -1.37
SKP1-208ENST00000521216 FAM90A1Q86YD7 464 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 CELF5Q8N6W0 485 aaKnown RBP6.48□□□□□ -1.37
SKP1-208ENST00000521216 OR56A1Q8NGH5 318 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 NEU1Q99519 415 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 ZSWIM1Q9BR11 485 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 TEX101Q9BY14 249 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 TMEM60Q9H2L4 133 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 GEMIN8Q9NWZ8 242 aaKnown RBP6.48□□□□□ -1.37
SKP1-208ENST00000521216 CFAP97Q9P2B7 532 aa6.48□□□□□ -1.37
SKP1-208ENST00000521216 AATKQ6ZMQ8 1374 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 A0A1W2PPL8 197 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 CFAP69A5D8W1 941 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 ZNF785A8K8V0 405 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 TRIM24O15164 1050 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 PRC1O43663 620 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 SPATA31D3P0C874 917 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 HDCP19113 662 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 KCNJ5P48544 419 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 USP14P54578 494 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 LCE4AQ5TA78 99 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 CCDC181Q5TID7 509 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 AGAP9Q5VTM2 703 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 RNF207Q6ZRF8 634 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 SPATA31D4Q6ZUB0 917 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 SPRED1Q7Z699 444 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 ZFPM1Q8IX07 1006 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 RHOT2Q8IXI1 618 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 FAM156AQ8NDB6 213 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 ZNF768Q9H5H4 540 aaKnown RBP6.47□□□□□ -1.37
SKP1-208ENST00000521216 CDYLQ9Y232 598 aa6.47□□□□□ -1.37
SKP1-208ENST00000521216 AHRRA9YTQ3 701 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 DIRC3C9JPN6 131 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 TPP1O14773 563 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 ERN1O75460 977 aaKnown RBP6.46□□□□□ -1.38
SKP1-208ENST00000521216 MATN4O95460 622 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 GNAI2P04899 355 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 C1SP09871 688 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 KITP10721 976 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 GCSHP23434 173 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 AGFG1P52594 562 aaKnown RBP6.46□□□□□ -1.38
SKP1-208ENST00000521216 GPSM2P81274 684 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 FAM189BP81408 668 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 CNN3Q15417 329 aaKnown RBP6.46□□□□□ -1.38
SKP1-208ENST00000521216 METRNLQ641Q3 311 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 FOXR2Q6PJQ5 311 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 KSR2Q6VAB6 950 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 SRGAP1Q7Z6B7 1085 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 KIAA0319LQ8IZA0 1049 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 TMIEQ8NEW7 156 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 NUP133Q8WUM0 1156 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 KLHL32Q96NJ5 620 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 ZMAT3Q9HA38 289 aaKnown RBP6.46□□□□□ -1.38
SKP1-208ENST00000521216 RSAD1Q9HA92 442 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 KLHL11Q9NVR0 708 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 CEP72Q9P209 647 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 USP25Q9UHP3 1055 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 L1RE1Q9UN81 338 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 FAM50BQ9Y247 325 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 MAP3K2Q9Y2U5 619 aa6.46□□□□□ -1.38
SKP1-208ENST00000521216 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.46□□□□□ -1.38
SKP1-208ENST00000521216 A0A1B0GTW7 788 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 GRXCR1A8MXD5 290 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 PRRG2O14669 202 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 NCR1O76036 304 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 ADRB1P08588 477 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 RARBP10826 455 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 FCER1AP12319 257 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 GNALP38405 381 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 ZNF135P52742 658 aaPredicted RBP6.45□□□□□ -1.38
SKP1-208ENST00000521216 SOX8P57073 446 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 HSD11B2P80365 405 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 DGCR2P98153 550 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 RNF220Q5VTB9 566 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 DARS2Q6PI48 645 aaKnown RBP6.45□□□□□ -1.38
SKP1-208ENST00000521216 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.45□□□□□ -1.38
SKP1-208ENST00000521216 MAEAQ7L5Y9 396 aa6.45□□□□□ -1.38
SKP1-208ENST00000521216 CHST15Q7LFX5 561 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms