RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 NPTXRO95502 500 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 GNA14O95837 355 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 LDHCP07864 332 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 CHRNA3P32297 505 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 FYB2Q5VWT5 728 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 CCDC62Q6P9F0 684 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 RGS9BPQ6ZS82 235 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 ASRGL1Q7L266 308 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 CELF1Q92879 486 aaKnown RBP10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 KCNN1Q92952 543 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 ZNF333Q96JL9 665 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 RILPQ96NA2 401 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 MIPEPQ99797 713 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 NUP85Q9BW27 656 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 CADM1Q9BY67 442 aaKnown RBP10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 GPBP1L1Q9HC44 474 aaPredicted RBP10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 TTLL13PA6NNM8 815 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 SPDYE16A6NNV3 312 aaPredicted RBP10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 TJP3O95049 919 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 CD58P19256 250 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 SOX5P35711 763 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 PTGIRP43119 386 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 GALK1P51570 392 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 POU5F1Q01860 360 aaKnown RBP10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 GRM4Q14833 912 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 EFTUD2Q15029 972 aaKnown RBP eCLIP10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 GRIK5Q16478 980 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 GRAMD1BQ3KR37 738 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 CBWD6Q4V339 395 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 CBWD3Q5JTY5 395 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 CBWD5Q5RIA9 395 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 SHKBP1Q8TBC3 707 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 PYDC1Q8WXC3 89 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 CEP95Q96GE4 821 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 RUNDC3BQ96NL0 473 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 CCDC68Q9H2F9 335 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 MOSPD1Q9UJG1 213 aa10.68□□□□□ -0.7
PDGFRB-207ENST00000520579 HTR3EA5X5Y0 456 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 B2RBV5 119 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 ATP5DP30049 168 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 SPARCL1Q14515 664 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 IZUMO3Q5VZ72 239 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 PASD1Q8IV76 773 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 DCLK2Q8N568 766 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 SYT2Q8N9I0 419 aaPredicted RBP10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 DEPTORQ8TB45 409 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 SLC7A6OSQ96CW6 309 aaPredicted RBP10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 LRCH1Q9Y2L9 728 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 LRRC42Q9Y546 428 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 BAZ2AQ9UIF9 1905 aaKnown RBP10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 H0YIN7 160 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 CYP26A1O43174 497 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 HIRAP54198 1017 aaPredicted RBP10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 DHX34Q14147 1143 aaKnown RBP10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 C1orf146Q5VVC0 180 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 TMEM214Q6NUQ4 689 aaKnown RBP10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 SLC13A5Q86YT5 568 aaPredicted RBP10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 ANKRD35Q8N283 1001 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 PAF1Q8N7H5 531 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 FAM84BQ96KN1 310 aaPredicted RBP10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 DCLRE1BQ9H816 532 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 DNAJC18Q9H819 358 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 MAGEF1Q9HAY2 307 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 PARP2Q9UGN5 583 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 STXBP5LQ9Y2K9 1186 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 T-ENOLP0DO92 83 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 SERPINB6P35237 376 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 KNOP1Q1ED39 458 aaKnown RBP10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 LPCAT4Q643R3 524 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 SLC7A5P1Q8MH63 180 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 FBXO27Q8NI29 283 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 NSUN4Q96CB9 384 aaKnown RBP10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 MAGEB18Q96M61 343 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 RBM15Q96T37 977 aaKnown RBP eCLIP10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 EDEM3Q9BZQ6 932 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 PPME1Q9Y570 386 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 HEY1Q9Y5J3 304 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 KDM3BQ7LBC6 1761 aa10.67□□□□□ -0.7
PDGFRB-207ENST00000520579 MAGEA13PA6NCF6 341 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 O00370 1275 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 NELFEP18615 380 aaKnown RBP10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 KRT4P19013 534 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 HOXA13P31271 388 aaPredicted RBP10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 OR52E8Q6IFG1 317 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 SLC2A7Q6PXP3 512 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 OTOAQ7RTW8 1153 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 RASSF3Q86WH2 238 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 ZBED8Q8IZ13 594 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 CHD4Q14839 1912 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 LAD1O00515 517 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 PODXLO00592 558 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 CALUO43852 315 aaPredicted RBP10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 SGPL1O95470 568 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 TTC4O95801 387 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 TTLL1O95922 423 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 CYP1A1P04798 512 aaPredicted RBP10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 RRM1P23921 792 aa10.66□□□□□ -0.7
PDGFRB-207ENST00000520579 ALDH18A1P54886 795 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms