RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 CLCA2Q9UQC9 943 aa12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 ITSN1Q15811 1721 aa12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 USP27XA6NNY8 438 aa12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 CSF1RP07333 972 aa12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 MYBL2P10244 700 aa12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 SPP2Q13103 211 aa12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 SYT2Q8N9I0 419 aaPredicted RBP12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 ATP6V1G3Q96LB4 118 aa12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 GCOM2Q9BZD3 368 aaPredicted RBP12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 MPP6Q9NZW5 540 aa12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 SENP1Q9P0U3 644 aa12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 KDM6AO15550 1401 aaPredicted RBP12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 YWHABP31946 246 aaKnown RBP12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 EIF2B2P49770 351 aaKnown RBP12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 SF3B3Q15393 1217 aaKnown RBP12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 NUGGCQ68CJ6 796 aa12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 ST13P5Q8NFI4 369 aaPredicted RBP12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 URGCPQ8TCY9 931 aa12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 KLHL25Q9H0H3 589 aa12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 ASCC2Q9H1I8 757 aaPredicted RBP12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.73□□□□□ -0.37
ERGIC1-208ENST00000520399 FRMPD1Q5SYB0 1578 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 PIK3C2BO00750 1634 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 NEMP1O14524 444 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 CAMTA2O94983 1202 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 CSPG5O95196 566 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 C4BPBP20851 252 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 MRGBPQ9NV56 204 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 DAGLAQ9Y4D2 1042 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 EMSYQ7Z589 1322 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 PDXKO00764 312 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 PJA2O43164 708 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 DPYDQ12882 1025 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 NKX1-1Q15270 411 aaPredicted RBP12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 SYBUQ9NX95 663 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 WDR37Q9Y2I8 494 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 RWDD3Q9Y3V2 267 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 PFASO15067 1338 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 PDS5AQ29RF7 1337 aaKnown RBP12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 CPS1P31327 1500 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 USP32Q8NFA0 1604 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 FAM187AA6NFU0 413 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 VHLP40337 213 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 MDH1P40925 334 aaKnown RBP12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 TAP1Q03518 808 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 NFX1Q12986 1120 aaKnown RBP12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 DMC1Q14565 340 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 EFTUD2Q15029 972 aaKnown RBP eCLIP12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 RBBP7Q16576 425 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 TWF2Q6IBS0 349 aaKnown RBP12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 SNF8Q96H20 258 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 GINS4Q9BRT9 223 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 MTMR4Q9NYA4 1195 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 RBAKQ9NYW8 714 aaPredicted RBP12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 INPP5FQ9Y2H2 1132 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 SUPT3HB4E1H0 165 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 SERPINB8P50452 374 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 HDLBPQ00341 1268 aaKnown RBP12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 EPM2AIP1Q7L775 607 aaPredicted RBP12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 GSPT2Q8IYD1 628 aaKnown RBP12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 GRAMD1AQ96CP6 724 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 GTSE1Q9NYZ3 720 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 HPCAL4Q9UM19 191 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 APOBEC2Q9Y235 224 aaKnown RBP12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 FHOD1Q9Y613 1164 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 KIAA1210Q9ULL0 1709 aa12.72□□□□□ -0.37
ERGIC1-208ENST00000520399 NNMTP40261 264 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 KCNJ6P48051 423 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 ADARP55265 1226 aaKnown RBP12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 ZNF211Q13398 564 aaPredicted RBP12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 ADCK1Q86TW2 530 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 HNRNPLLQ8WVV9 542 aaKnown RBP12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 C7orf25Q9BPX7 421 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 EURLQ9NYK6 297 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 FBXO9Q9UK97 447 aaPredicted RBP12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 PCDHA10Q9Y5I2 948 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 RALBP11234 206 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 SDC4P31431 198 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 MORF4L2Q15014 288 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 ADRM1Q16186 407 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 ZNF280DQ6N043 979 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 CROCCP3Q8IVE0 287 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 ZKSCAN4Q969J2 545 aaPredicted RBP12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 PBXIP1Q96AQ6 731 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 RNF25Q96BH1 459 aaPredicted RBP12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 AGPAT1Q99943 283 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 ATXN10Q9UBB4 475 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 AGO2Q9UKV8 859 aaKnown RBP12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 RNF103-CHMP3A0A140T963 221 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 RASA4BC9J798 803 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 RASA4O43374 803 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 NPM3O75607 178 aaKnown RBP12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 ROR1Q01973 937 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 ZNF543Q08ER8 600 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 STRIP1Q5VSL9 837 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 KCNV1Q6PIU1 500 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 C16orf86Q6ZW13 317 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 RASSF3Q86WH2 238 aa12.71□□□□□ -0.37
ERGIC1-208ENST00000520399 APPL2Q8NEU8 664 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms