RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 ZBTB8OSQ8IWT0 167 aa10.23□□□□□ -0.77
CTNNA1-221ENST00000520339 CCDC113Q9H0I3 377 aa10.23□□□□□ -0.77
CTNNA1-221ENST00000520339 C2orf40Q9H1Z8 148 aa10.23□□□□□ -0.77
CTNNA1-221ENST00000520339 PDZD7Q9H5P4 517 aa10.23□□□□□ -0.77
CTNNA1-221ENST00000520339 MAN1C1Q9NR34 630 aa10.23□□□□□ -0.77
CTNNA1-221ENST00000520339 SH2B1Q9NRF2 756 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-221ENST00000520339 PARP2Q9UGN5 583 aa10.23□□□□□ -0.77
CTNNA1-221ENST00000520339 DCTN4Q9UJW0 460 aa10.23□□□□□ -0.77
CTNNA1-221ENST00000520339 USP20Q9Y2K6 914 aa10.23□□□□□ -0.77
CTNNA1-221ENST00000520339 ZNF318Q5VUA4 2279 aa10.23□□□□□ -0.77
CTNNA1-221ENST00000520339 ZMYM2Q9UBW7 1377 aa10.23□□□□□ -0.77
CTNNA1-221ENST00000520339 CCDC195A0A1B0GUA6 201 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 N4BP3O15049 544 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 TADA2AO75478 443 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 GLUD1P00367 558 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 NPR3P17342 541 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 U2AF2P26368 475 aaKnown RBP eCLIP10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 NAMPTP43490 491 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 TOB1P50616 345 aaPredicted RBP10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 MAPK6Q16659 721 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 USP41Q3LFD5 358 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 EEF1DP3Q658K8 133 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 LILRA6Q6PI73 481 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 CYP26C1Q6V0L0 522 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 CCDC149Q6ZUS6 474 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 FAM184AQ8NB25 1140 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 DEPTORQ8TB45 409 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 HDAC7Q8WUI4 952 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 RABGGTAQ92696 567 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 ACSF2Q96CM8 615 aaPredicted RBP10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 INSM2Q96T92 566 aaPredicted RBP10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 CXCL16Q9H2A7 254 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 POLD4Q9HCU8 107 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 WDR6Q9NNW5 1121 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 SNTG2Q9NY99 539 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 STIM2Q9P246 746 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 FNIP2Q9P278 1114 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 ADAM28Q9UKQ2 775 aa10.22□□□□□ -0.77
CTNNA1-221ENST00000520339 PTGESO14684 152 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 CAPN5O15484 640 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 RFPL2O75678 378 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 RECQL4O94761 1208 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 EDN1P05305 212 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 PRKCBP05771 671 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 MYBP10242 640 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 CCT6AP40227 531 aaKnown RBP10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 TUSC3Q13454 348 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 PRPF4BQ13523 1007 aaKnown RBP10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 PDIA5Q14554 519 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 HSP90AA2PQ14568 343 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 PPP2R5AQ15172 486 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 NAB2Q15742 525 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 C8orf34Q49A92 452 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 NT5DC1Q5TFE4 455 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 HAUS3Q68CZ6 603 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 PALB2Q86YC2 1186 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 ALDH16A1Q8IZ83 802 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 RHBDD1Q8TEB9 315 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 RIN2Q8WYP3 895 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 ZNF707Q96C28 371 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 B3GALT6Q96L58 329 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 PAAF1Q9BRP4 392 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 KIFC3Q9BVG8 833 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 BHMT2Q9H2M3 363 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 PLEKHA4Q9H4M7 779 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 CACNG4Q9UBN1 327 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 DPP7Q9UHL4 492 aa10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 NOL7Q9UMY1 257 aaKnown RBP10.21□□□□□ -0.77
CTNNA1-221ENST00000520339 TNFRSF10BO14763 440 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 TGM5O43548 720 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 N4BP1O75113 896 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 THP07101 528 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 SPATA31D3P0C874 917 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 LIG1P18858 919 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 EFNA5P52803 228 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 TDGQ13569 410 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 IL17AQ16552 155 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 RTP2Q5QGT7 225 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 ELMSAN1Q6PJG2 1045 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 SPATA31D4Q6ZUB0 917 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 ZNF295-AS1Q8N0V1 137 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 IGSF22Q8N9C0 903 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 KIFAP3Q92845 792 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 IFT74Q96LB3 600 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 GRIP2Q9C0E4 1043 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 NT5C3AQ9H0P0 336 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 KCNK12Q9HB15 430 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 POLMQ9NP87 494 aaPredicted RBP10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 LRWD1Q9UFC0 647 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 PCDHB6Q9Y5E3 794 aa10.2□□□□□ -0.78
CTNNA1-221ENST00000520339 C5orf42Q9H799 3197 aa10.19□□□□□ -0.78
CTNNA1-221ENST00000520339 SF3B1O75533 1304 aaKnown RBP eCLIP10.19□□□□□ -0.78
CTNNA1-221ENST00000520339 CASTOR2A6NHX0 329 aa10.19□□□□□ -0.78
CTNNA1-221ENST00000520339 KIF4AO95239 1232 aa10.19□□□□□ -0.78
CTNNA1-221ENST00000520339 RPL17P18621 184 aaKnown RBP10.19□□□□□ -0.78
CTNNA1-221ENST00000520339 CREMQ03060 361 aa10.19□□□□□ -0.78
CTNNA1-221ENST00000520339 GNL2Q13823 731 aaKnown RBP10.19□□□□□ -0.78
CTNNA1-221ENST00000520339 DCAF4L1Q3SXM0 396 aa10.19□□□□□ -0.78
CTNNA1-221ENST00000520339 FAM171A1Q5VUB5 890 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms