RNA–Protein interactions for RNA: ENST00000518847.1

TRAPPC2-206, Transcript of trafficking protein particle complex 2, humanhuman

TSL 4

Gene TRAPPC2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-206ENST00000518847 C5orf67F2Z3F1 127 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 PIRO00625 290 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 SYN3O14994 580 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 C4BPAP04003 597 aaKnown RBP12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 ITGB3P05106 788 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 GALTP07902 379 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 TPM1P09493 284 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 ODC1P11926 461 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 BMPR1AP36894 532 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 GCLMP48507 274 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 PLCB3Q01970 1234 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 PDCD11Q14690 1871 aaKnown RBP12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 KRT31Q15323 416 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 EXOC3L4Q17RC7 722 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 PAN2Q504Q3 1202 aaKnown RBP12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 GLRA4Q5JXX5 417 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 PPP2R2DQ66LE6 453 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 GPR153Q6NV75 609 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 C15orf39Q6ZRI6 1047 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 LUZP1Q86V48 1076 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 PPP2R3CQ969Q6 453 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 EEF2KMTQ96G04 330 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 HPDLQ96IR7 371 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 ZMAT2Q96NC0 199 aaKnown RBP12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 LMAN2LQ9H0V9 348 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 PRO3102Q9H379 93 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 NRDE2Q9H7Z3 1164 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 AGAP1Q9UPQ3 857 aa12.75□□□□□ -0.37
TRAPPC2-206ENST00000518847 MEIS3P2A8K0S8 358 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 LGALS16A8MUM7 142 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 KPNA7A9QM74 516 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 NRP1O14786 923 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 HUS1O60921 280 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 COPB1P53618 953 aaKnown RBP12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 UBASH3AP57075 661 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 NAB2Q15742 525 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 PTPROQ16827 1216 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 ZNF699Q32M78 642 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 ZNF667Q5HYK9 610 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 HABP4Q5JVS0 413 aaKnown RBP12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 ELMSAN1Q6PJG2 1045 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 DSTYKQ6XUX3 929 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 IRF2BP1Q8IU81 584 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 EFCAB13Q8IY85 973 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 TOP6BLQ8N6T0 577 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 C1orf127Q8N9H9 656 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 COLGALT1Q8NBJ5 622 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 TIFAQ96CG3 184 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 MED15Q96RN5 788 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 NUP58Q9BVL2 599 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 CWH43Q9H720 699 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 CYP3A43Q9HB55 503 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 GDAP2Q9NXN4 497 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 DPP7Q9UHL4 492 aa12.74□□□□□ -0.37
TRAPPC2-206ENST00000518847 TRIP11Q15643 1979 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 A0A1W2PQC6 194 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 LINC01553A4QN01 128 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 GOLGA6L3A6NEY3 463 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 CASTOR2A6NHX0 329 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 GOLGA6L6A8MZA4 724 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 H7C4K7 107 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 C1RP00736 705 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 CCDC172P0C7W6 258 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 TRIM49P0CI25 452 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 TRIM49CP0CI26 452 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 TYMPP19971 482 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 POLR2BP30876 1174 aaKnown RBP12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 CTNNB1P35222 781 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 LHX1P48742 406 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 CLCNKBP51801 687 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 LILRA4P59901 499 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 ERVK-21P61565 698 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 UBXN1Q04323 297 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 SMARCB1Q12824 385 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 USP41Q3LFD5 358 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 TDRD10Q5VZ19 366 aaKnown RBP12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 KIAA1841Q6NSI8 718 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 SARM1Q6SZW1 724 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 DDX53Q86TM3 631 aaKnown RBP12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 THEM5Q8N1Q8 247 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 ZSWIM2Q8NEG5 633 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 C18orf25Q96B23 403 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 IGSF21Q96ID5 467 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 NT5C1BQ96P26 610 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 POP1Q99575 1024 aaKnown RBP12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 PBX4Q9BYU1 374 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 NGRNQ9NPE2 291 aaKnown RBP12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 MIOSQ9NXC5 875 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 GCNT4Q9P109 453 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 TUBGCP4Q9UGJ1 667 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 FBXL5Q9UKA1 691 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 MRPL42Q9Y6G3 142 aaKnown RBP12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 ANK1P16157 1881 aa12.73□□□□□ -0.37
TRAPPC2-206ENST00000518847 A0A1B0GTH6 734 aa12.72□□□□□ -0.37
TRAPPC2-206ENST00000518847 DDHD2O94830 711 aa12.72□□□□□ -0.37
TRAPPC2-206ENST00000518847 ASS1P00966 412 aaKnown RBP12.72□□□□□ -0.37
TRAPPC2-206ENST00000518847 HLA-DRAP01903 254 aa12.72□□□□□ -0.37
TRAPPC2-206ENST00000518847 CA3P07451 260 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms