RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CEP72Q9P209 647 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 CFAP97Q9P2B7 532 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 CHST2Q9Y4C5 530 aa4.69□□□□□ -1.66
VPS13B-207ENST00000518569 GAGE12BA1L429 117 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 GAGE12HA6NDE8 117 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 CAPN8A6NHC0 703 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 LEFTY2O00292 366 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 ZBED1O96006 694 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 SPATA31D3P0C874 917 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 APOBEC3AP31941 199 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-207ENST00000518569 RAB1AP62820 205 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 PLS1Q14651 629 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 GRM3Q14832 879 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 USP39Q53GS9 565 aaKnown RBP4.68□□□□□ -1.66
VPS13B-207ENST00000518569 CCDC93Q567U6 631 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 SPDYAQ5MJ70 313 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 CYB5RLQ6IPT4 315 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 SPATA31D4Q6ZUB0 917 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 GDF7Q7Z4P5 450 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 PLBD2Q8NHP8 589 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 IL17DQ8TAD2 202 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 BRIX1Q8TDN6 353 aaKnown RBP4.68□□□□□ -1.66
VPS13B-207ENST00000518569 EXTL1Q92935 676 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 SLC46A2Q9BY10 475 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 B3GNT5Q9BYG0 378 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 BRD9Q9H8M2 597 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 SARS2Q9NP81 518 aaKnown RBP4.68□□□□□ -1.66
VPS13B-207ENST00000518569 DDX20Q9UHI6 824 aaKnown RBP4.68□□□□□ -1.66
VPS13B-207ENST00000518569 EIF2B4Q9UI10 523 aaKnown RBP4.68□□□□□ -1.66
VPS13B-207ENST00000518569 L1RE1Q9UN81 338 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 SORCS3Q9UPU3 1222 aa4.68□□□□□ -1.66
VPS13B-207ENST00000518569 FRMPD2Q68DX3 1309 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-207ENST00000518569 CDHR4A6H8M9 788 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 SLC6A2P23975 617 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 CACNB3P54284 484 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 USP14P54578 494 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 KIF22Q14807 665 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 UTP14CQ5TAP6 766 aaKnown RBP4.67□□□□□ -1.66
VPS13B-207ENST00000518569 RNF207Q6ZRF8 634 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 MAEAQ7L5Y9 396 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 PPP1R3BQ86XI6 285 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 TBC1D15Q8TC07 691 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 SCAMP4Q969E2 229 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 TTC17Q96AE7 1141 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 MED15Q96RN5 788 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 NEU1Q99519 415 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 KLHL11Q9NVR0 708 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 MYRFQ9Y2G1 1151 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 ATP11BQ9Y2G3 1177 aa4.67□□□□□ -1.66
VPS13B-207ENST00000518569 PRSS29PA6NIE9 313 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 A6NNZ2 444 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 AHRRA9YTQ3 701 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 PHGDHO43175 533 aaKnown RBP4.66□□□□□ -1.66
VPS13B-207ENST00000518569 FRS3O43559 492 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 PRC1O43663 620 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 CAND2O75155 1236 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 PPFIA4O75335 1185 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 AGFG2O95081 481 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 SCAF4O95104 1147 aaKnown RBP4.66□□□□□ -1.66
VPS13B-207ENST00000518569 MATN4O95460 622 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 CHEK2O96017 543 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 ITGB1P05556 798 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 GJB1P08034 283 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 RARBP10826 455 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 GNALP38405 381 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 RNASE9P60153 205 aaKnown RBP4.66□□□□□ -1.66
VPS13B-207ENST00000518569 FAM193AP78312 1265 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 NRN1LQ496H8 165 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 TSHZ3Q63HK5 1081 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 ARMC6Q6NXE6 501 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 SH2D3CQ8N5H7 860 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 CPT1CQ8TCG5 803 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 DDX17Q92841 729 aaKnown RBP4.66□□□□□ -1.66
VPS13B-207ENST00000518569 PNKPQ96T60 521 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 C1orf43Q9BWL3 253 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 SIK2Q9H0K1 926 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 RNPEPQ9H4A4 650 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 GPR35Q9HC97 309 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 DDX21Q9NR30 783 aaKnown RBP eCLIP4.66□□□□□ -1.66
VPS13B-207ENST00000518569 CNNM1Q9NRU3 951 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 USP15Q9Y4E8 981 aaPredicted RBP4.66□□□□□ -1.66
VPS13B-207ENST00000518569 PCDHA1Q9Y5I3 950 aa4.66□□□□□ -1.66
VPS13B-207ENST00000518569 RNASET2O00584 256 aaKnown RBP4.65□□□□□ -1.67
VPS13B-207ENST00000518569 TPP1O14773 563 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 ZNF185O15231 689 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 RPS6KA4O75676 772 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 PRSS23O95084 383 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 MYBP10242 640 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 RHCEP18577 417 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 TBX4P57082 545 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 NOMO3P69849 1222 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 RHDQ02161 417 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 SLFN5Q08AF3 891 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 TCF15Q12870 199 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 FOXE3Q13461 319 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 GALEQ14376 348 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 CNN3Q15417 329 aaKnown RBP4.65□□□□□ -1.67
VPS13B-207ENST00000518569 PDCD4Q53EL6 469 aaKnown RBP4.65□□□□□ -1.67
VPS13B-207ENST00000518569 NOMO2Q5JPE7 1267 aa4.65□□□□□ -1.67
VPS13B-207ENST00000518569 KHDC1LQ5JSQ8 128 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms