RNA–Protein interactions for RNA: ENST00000518387.1

CTD-2270F17.1-201, humanhuman

TSL 1 (best) BASIC

Gene CTD-2270F17.1, Length 1,215 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2270F17.1-201ENST00000518387 RPN1P04843 607 aaKnown RBP11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 ADH1AP07327 375 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 TKTP29401 623 aaKnown RBP11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 HOXD13P35453 343 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 EHHADHQ08426 723 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 ELAVL2Q12926 359 aaKnown RBP11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 SMAD4Q13485 552 aaKnown RBP11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 TMEM132DQ14C87 1099 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 PSMD5Q16401 504 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 KIAA0319Q5VV43 1072 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 ANKRD54Q6NXT1 300 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 KANK3Q6NY19 840 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 DCLRE1AQ6PJP8 1040 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CRELD2Q6UXH1 353 aaPredicted RBP11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 EPM2AIP1Q7L775 607 aaPredicted RBP11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 PALB2Q86YC2 1186 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 C12orf76Q8N812 135 aaPredicted RBP11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 SCFD1Q8WVM8 642 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 DDX27Q96GQ7 796 aaKnown RBP11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 MSLNLQ96KJ4 702 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 FAM84AQ96KN4 292 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 TTPALQ9BTX7 342 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CHST7Q9NS84 486 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 RBAKQ9NYW8 714 aaPredicted RBP11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CHMP5Q9NZZ3 219 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CDH22Q9UJ99 828 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 UBQLN1Q9UMX0 589 aaKnown RBP11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 UBE4BO95155 1302 aa11.76□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 DENND4AQ7Z401 1863 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 PPEF2O14830 753 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CLIC2O15247 247 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 LILRB3O75022 631 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 GLUD1P00367 558 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 WEE2P0C1S8 567 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 SPATA31D3P0C874 917 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 GARTP22102 1010 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 SP100P23497 879 aaPredicted RBP11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CYP2J2P51589 502 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CLCN4P51793 760 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 WNT7BP56706 349 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 STK4Q13043 487 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 KCNC3Q14003 757 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 RARS2Q5T160 578 aaKnown RBP11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CD300LGQ6UXG3 332 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 SPATA31D4Q6ZUB0 917 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 PPFIBP1Q86W92 1011 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 BRSK2Q8IWQ3 736 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 EFCAB13Q8IY85 973 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 GPD1LQ8N335 351 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 SMRP1Q8NCR6 262 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 KIAA0895Q8NCT3 520 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 BEST2Q8NFU1 509 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 ZNF507Q8TCN5 953 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 KCNV2Q8TDN2 545 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 SLC22A17Q8WUG5 538 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CCDC47Q96A33 483 aaKnown RBP11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 MAN1C1Q9NR34 630 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 HSPBP1Q9NZL4 362 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 FAM50BQ9Y247 325 aa11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 USP15Q9Y4E8 981 aaPredicted RBP11.75□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 TRAPPC3O43617 180 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 EXTL3O43909 919 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 IL18RAPO95256 599 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 LDHAP00338 332 aaKnown RBP11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 MYL1P05976 194 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 SSTR3P32745 418 aaPredicted RBP11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 RPL9P32969 192 aaKnown RBP11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 TFAMQ00059 246 aaKnown RBP11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CREMQ03060 361 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 FAM160A1Q05DH4 1040 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 DPYDQ12882 1025 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 PNOCQ13519 176 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 PUS10Q3MIT2 529 aaKnown RBP11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 SPATA1Q5VX52 437 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 LMBRD2Q68DH5 695 aaPredicted RBP11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 SYCE2Q6PIF2 218 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 TMC5Q6UXY8 1006 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 HS2ST1Q7LGA3 356 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CBWD2Q8IUF1 395 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CD302Q8IX05 232 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 FMR1NBQ8N0W7 255 aaPredicted RBP11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 RDH13Q8NBN7 331 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 FEZF2Q8TBJ5 459 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 PIK3R5Q8WYR1 880 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 ERCC4Q92889 916 aaPredicted RBP11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CCDC34Q96HJ3 373 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 FBXL18Q96ME1 805 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 AGPAT3Q9NRZ7 376 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 WDR70Q9NW82 654 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 MAPK8IP1Q9UQF2 711 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 DOCK6Q96HP0 2047 aa11.74□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 ADAM12O43184 909 aa11.73□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 TGFB1I1O43294 461 aa11.73□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 GADD45BO75293 160 aaPredicted RBP11.73□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 CYP3A5P20815 502 aa11.73□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 FGFR3P22607 806 aa11.73□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 LRPAP1P30533 357 aa11.73□□□□□ -0.53
CTD-2270F17.1-201ENST00000518387 ARPP19P56211 112 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms