RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 TLR10Q9BXR5 811 aa25.04■■□□□ 1.6
SLIT3-204ENST00000518140 OSGEPQ9NPF4 335 aa25.04■■□□□ 1.6
SLIT3-204ENST00000518140 CASP8AP2Q9UKL3 1982 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 CFHP08603 1231 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 TMEM253P0C7T8 217 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 H2AFXP16104 143 aaPredicted RBP25.03■■□□□ 1.6
SLIT3-204ENST00000518140 TBXAS1P24557 533 aaPredicted RBP25.03■■□□□ 1.6
SLIT3-204ENST00000518140 HOXD10P28358 340 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 NOTUMQ6P988 496 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 NME8Q8N427 588 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 UBR7Q8N806 425 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 PSMB7Q99436 277 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 ASB7Q9H672 318 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 CHORDC1Q9UHD1 332 aaPredicted RBP25.03■■□□□ 1.6
SLIT3-204ENST00000518140 POLIQ9UNA4 740 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 HMGCRP04035 888 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 ITGB3P05106 788 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 WEE2P0C1S8 567 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 SSTR3P32745 418 aaPredicted RBP25.03■■□□□ 1.6
SLIT3-204ENST00000518140 ZNF699Q32M78 642 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 SLC35G2Q8TBE7 412 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 RAET1EQ8TD07 263 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 CNTN6Q9UQ52 1028 aa25.03■■□□□ 1.6
SLIT3-204ENST00000518140 PIN4Q9Y237 131 aaKnown RBP25.03■■□□□ 1.6
SLIT3-204ENST00000518140 ATP8B3O60423 1300 aa25.02■■□□□ 1.6
SLIT3-204ENST00000518140 CD58P19256 250 aa25.02■■□□□ 1.6
SLIT3-204ENST00000518140 YY1P25490 414 aa25.02■■□□□ 1.6
SLIT3-204ENST00000518140 POU5F1Q01860 360 aaKnown RBP25.02■■□□□ 1.6
SLIT3-204ENST00000518140 KYAT1Q16773 422 aa25.02■■□□□ 1.6
SLIT3-204ENST00000518140 DCAF4L1Q3SXM0 396 aa25.02■■□□□ 1.6
SLIT3-204ENST00000518140 SCARA5Q6ZMJ2 495 aa25.02■■□□□ 1.6
SLIT3-204ENST00000518140 TPCN2Q8NHX9 752 aa25.02■■□□□ 1.6
SLIT3-204ENST00000518140 CELF4Q9BZC1 486 aaKnown RBP25.02■■□□□ 1.6
SLIT3-204ENST00000518140 NIF3L1Q9GZT8 377 aa25.02■■□□□ 1.6
SLIT3-204ENST00000518140 NXF3Q9H4D5 531 aaKnown RBP25.02■■□□□ 1.6
SLIT3-204ENST00000518140 NXF1Q9UBU9 619 aaKnown RBP25.02■■□□□ 1.6
SLIT3-204ENST00000518140 SNX12Q9UMY4 172 aa25.02■■□□□ 1.6
SLIT3-204ENST00000518140 PACSIN2Q9UNF0 486 aaPredicted RBP25.02■■□□□ 1.6
SLIT3-204ENST00000518140 PCDHB2Q9Y5E7 798 aa25.02■■□□□ 1.6
SLIT3-204ENST00000518140 ANKRD62A6NC57 917 aa25.01■■□□□ 1.59
SLIT3-204ENST00000518140 TUBB2AQ13885 445 aa25.01■■□□□ 1.59
SLIT3-204ENST00000518140 PTPROQ16827 1216 aa25.01■■□□□ 1.59
SLIT3-204ENST00000518140 TAF2Q6P1X5 1199 aa25.01■■□□□ 1.59
SLIT3-204ENST00000518140 RBBP8NLQ8NC74 664 aaPredicted RBP25.01■■□□□ 1.59
SLIT3-204ENST00000518140 CTNNBL1Q8WYA6 563 aaPredicted RBP25.01■■□□□ 1.59
SLIT3-204ENST00000518140 CAPZA3Q96KX2 299 aa25.01■■□□□ 1.59
SLIT3-204ENST00000518140 ZMAT2Q96NC0 199 aaKnown RBP25.01■■□□□ 1.59
SLIT3-204ENST00000518140 TUBB2BQ9BVA1 445 aa25.01■■□□□ 1.59
SLIT3-204ENST00000518140 NOC2LQ9Y3T9 749 aaKnown RBP25.01■■□□□ 1.59
SLIT3-204ENST00000518140 RTN2O75298 545 aa25.01■■□□□ 1.59
SLIT3-204ENST00000518140 CXCR5P32302 372 aa25.01■■□□□ 1.59
SLIT3-204ENST00000518140 ASPAP45381 313 aa25.01■■□□□ 1.59
SLIT3-204ENST00000518140 TMEM132DQ14C87 1099 aa25.01■■□□□ 1.59
SLIT3-204ENST00000518140 LRRC57Q8N9N7 239 aa25.01■■□□□ 1.59
SLIT3-204ENST00000518140 COG1Q8WTW3 980 aa25.01■■□□□ 1.59
SLIT3-204ENST00000518140 COG5Q9UP83 839 aa25.01■■□□□ 1.59
SLIT3-204ENST00000518140 A0A0A6YYK5 440 aaPredicted RBP25■■□□□ 1.59
SLIT3-204ENST00000518140 GZMAP12544 262 aa25■■□□□ 1.59
SLIT3-204ENST00000518140 AKAP5P24588 427 aa25■■□□□ 1.59
SLIT3-204ENST00000518140 UBXN11Q5T124 520 aa25■■□□□ 1.59
SLIT3-204ENST00000518140 APOL6Q9BWW8 343 aa25■■□□□ 1.59
SLIT3-204ENST00000518140 CISHQ9NSE2 258 aa25■■□□□ 1.59
SLIT3-204ENST00000518140 DDX20Q9UHI6 824 aaKnown RBP25■■□□□ 1.59
SLIT3-204ENST00000518140 CDY2AQ9Y6F7 541 aa25■■□□□ 1.59
SLIT3-204ENST00000518140 CTSHP09668 335 aa25■■□□□ 1.59
SLIT3-204ENST00000518140 MRPS6P82932 125 aaKnown RBP25■■□□□ 1.59
SLIT3-204ENST00000518140 PCBP1Q15365 356 aaKnown RBP eCLIP25■■□□□ 1.59
SLIT3-204ENST00000518140 WHAMMP3Q1A5X7 153 aa25■■□□□ 1.59
SLIT3-204ENST00000518140 FAM228AQ86W67 206 aa25■■□□□ 1.59
SLIT3-204ENST00000518140 ZNF296Q8WUU4 475 aaPredicted RBP25■■□□□ 1.59
SLIT3-204ENST00000518140 KIF12Q96FN5 646 aa25■■□□□ 1.59
SLIT3-204ENST00000518140 OSBPL7Q9BZF2 842 aa25■■□□□ 1.59
SLIT3-204ENST00000518140 EPC1Q9H2F5 836 aa25■■□□□ 1.59
SLIT3-204ENST00000518140 RNF39Q9H2S5 420 aa25■■□□□ 1.59
SLIT3-204ENST00000518140 NCANO14594 1321 aa24.99■■□□□ 1.59
SLIT3-204ENST00000518140 PDE2AO00408 941 aaPredicted RBP24.99■■□□□ 1.59
SLIT3-204ENST00000518140 POLR2BP30876 1174 aaKnown RBP24.99■■□□□ 1.59
SLIT3-204ENST00000518140 RAP1GAPP47736 663 aa24.99■■□□□ 1.59
SLIT3-204ENST00000518140 DNA2P51530 1060 aa24.99■■□□□ 1.59
SLIT3-204ENST00000518140 ZNF132P52740 706 aa24.99■■□□□ 1.59
SLIT3-204ENST00000518140 WDR72Q3MJ13 1102 aa24.99■■□□□ 1.59
SLIT3-204ENST00000518140 ZNF394Q53GI3 561 aa24.99■■□□□ 1.59
SLIT3-204ENST00000518140 SERINC5Q86VE9 423 aa24.99■■□□□ 1.59
SLIT3-204ENST00000518140 RFFLQ8WZ73 363 aa24.99■■□□□ 1.59
SLIT3-204ENST00000518140 ATMINO43313 823 aaPredicted RBP24.98■■□□□ 1.59
SLIT3-204ENST00000518140 CHRNA1P02708 482 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 CST5P28325 142 aaPredicted RBP24.98■■□□□ 1.59
SLIT3-204ENST00000518140 CDH8P55286 799 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 CLEC16AQ2KHT3 1053 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 MEI1Q5TIA1 1274 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 OSBPL9Q96SU4 736 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 MMS19Q96T76 1030 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 ZNF446Q9NWS9 450 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 DPP3Q9NY33 737 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 AGAP1Q9UPQ3 857 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 EFCAB8A8MWE9 144 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 GNA15P30679 374 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 BPIFB4P59827 614 aa24.98■■□□□ 1.59
SLIT3-204ENST00000518140 RSRC2Q7L4I2 434 aaKnown RBP24.98■■□□□ 1.59
SLIT3-204ENST00000518140 CPA5Q8WXQ8 436 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms