RNA–Protein interactions for RNA: ENST00000517744.1

IGKV1-35-201, Transcript of immunoglobulin kappa variable 1-35 (pseudogene), humanhuman

BASIC

Gene IGKV1-35, Length 285 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-35-201ENST00000517744 TRIM49CP0CI26 452 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 ATICP31939 592 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 CTNNB1P35222 781 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 GUCY2FP51841 1108 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 UBE3AQ05086 875 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 ELAVL2Q12926 359 aaKnown RBP11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 KCNJ12Q14500 433 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 MAN2A1Q16706 1144 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 TCP11X2Q5H9J9 407 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 HABP4Q5JVS0 413 aaKnown RBP11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 TCERG1LQ5VWI1 586 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 LMBRD2Q68DH5 695 aaPredicted RBP11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 KRT39Q6A163 491 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 GPR65Q8IYL9 337 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 RNF168Q8IYW5 571 aaPredicted RBP11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 TAF4BQ92750 862 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 TMEM169Q96HH4 297 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 ZNF560Q96MR9 790 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 VRTNQ9H8Y1 702 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 ADAM28Q9UKQ2 775 aa11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.73□□□□□ -0.53
IGKV1-35-201ENST00000517744 SF3B1O75533 1304 aaKnown RBP eCLIP11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 NT5C1B-RDH14C9J2C7 533 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 SOX1O00570 391 aaPredicted RBP11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 TRAPPC3O43617 180 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 B3GAT3O94766 335 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 KIF4AO95239 1232 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 VNN1O95497 513 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 AFPP02771 609 aaKnown RBP11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 ITGB1P05556 798 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 POLR2BP30876 1174 aaKnown RBP11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 PBX3P40426 434 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 MTIF2P46199 727 aaKnown RBP11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 GCLMP48507 274 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 FMO5P49326 533 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 TAF6P49848 677 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 MXI1P50539 228 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 LILRA4P59901 499 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 TPM4P67936 248 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 KRT17Q04695 432 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 KCNH2Q12809 1159 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 MYO1EQ12965 1108 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 DCAF17Q5H9S7 520 aaPredicted RBP11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 DDX53Q86TM3 631 aaKnown RBP11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 TMEM173Q86WV6 379 aaPredicted RBP11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 KLHL23Q8NBE8 558 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 C3orf58Q8NDZ4 430 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 FBXL13Q8NEE6 735 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 ANKRD20A12PQ8NF67 263 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 BCL7CQ8WUZ0 217 aaPredicted RBP11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 FAXDC2Q96IV6 333 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 SUSD3Q96L08 255 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 TUBGCP2Q9BSJ2 902 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 LMAN2LQ9H0V9 348 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 ZNF576Q9H609 170 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 LIMA1Q9UHB6 759 aaKnown RBP11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 AGAP1Q9UPQ3 857 aa11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 PRG3Q9Y2Y8 225 aaPredicted RBP11.72□□□□□ -0.53
IGKV1-35-201ENST00000517744 ARHGEF37A1IGU5 675 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 GTPBP10A4D1E9 387 aaKnown RBP11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 M0QZQ0 153 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 PPEF2O14830 753 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 PHACTR2O75167 634 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 TADA2AO75478 443 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 CST3P01034 146 aaPredicted RBP11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 FAM163BP0C2L3 166 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 CETN1Q12798 172 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 BIRC3Q13489 604 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 TRPC3Q13507 836 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 NCOA4Q13772 614 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 SGSM1Q2NKQ1 1148 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 SV2CQ496J9 727 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 CBWD6Q4V339 395 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 CBWD3Q5JTY5 395 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 MIIPQ5JXC2 388 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 CBWD5Q5RIA9 395 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 FUT10Q6P4F1 479 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 SPRED2Q7Z698 418 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 LUZP1Q86V48 1076 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 SPPL3Q8TCT6 385 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 HPDLQ96IR7 371 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 FAM84AQ96KN4 292 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 XYLT2Q9H1B5 865 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 GDAP2Q9NXN4 497 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 CACNG4Q9UBN1 327 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 PUF60Q9UHX1 559 aaKnown RBP11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 R3HCC1Q9Y3T6 440 aaKnown RBP11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 NUB1Q9Y5A7 615 aa11.71□□□□□ -0.53
IGKV1-35-201ENST00000517744 KPNA7A9QM74 516 aa11.7□□□□□ -0.54
IGKV1-35-201ENST00000517744 F8W810 466 aa11.7□□□□□ -0.54
IGKV1-35-201ENST00000517744 GOLGA6L19H0YKK7 550 aa11.7□□□□□ -0.54
IGKV1-35-201ENST00000517744 SYN3O14994 580 aa11.7□□□□□ -0.54
IGKV1-35-201ENST00000517744 SPTLC1O15269 473 aa11.7□□□□□ -0.54
IGKV1-35-201ENST00000517744 ASS1P00966 412 aaKnown RBP11.7□□□□□ -0.54
IGKV1-35-201ENST00000517744 HLA-DRAP01903 254 aa11.7□□□□□ -0.54
IGKV1-35-201ENST00000517744 SOD2P04179 222 aa11.7□□□□□ -0.54
IGKV1-35-201ENST00000517744 CYP11A1P05108 521 aa11.7□□□□□ -0.54
IGKV1-35-201ENST00000517744 TPM2P07951 284 aa11.7□□□□□ -0.54
IGKV1-35-201ENST00000517744 KRT19P08727 400 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms