RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 PDZD7Q9H5P4 517 aa28.37■■■□□ 2.13
COL13A1-210ENST00000517713 VIPAS39Q9H9C1 493 aa28.37■■■□□ 2.13
COL13A1-210ENST00000517713 EPB41L5Q9HCM4 733 aa28.37■■■□□ 2.13
COL13A1-210ENST00000517713 CPB2Q96IY4 423 aa28.36■■■□□ 2.13
COL13A1-210ENST00000517713 ZSWIM1Q9BR11 485 aa28.36■■■□□ 2.13
COL13A1-210ENST00000517713 AVENQ9NQS1 362 aaPredicted RBP28.36■■■□□ 2.13
COL13A1-210ENST00000517713 ANK1P16157 1881 aa28.36■■■□□ 2.13
COL13A1-210ENST00000517713 MANSC4A6NHS7 340 aaPredicted RBP28.36■■■□□ 2.13
COL13A1-210ENST00000517713 THAP12O43422 761 aa28.36■■■□□ 2.13
COL13A1-210ENST00000517713 ZNF132P52740 706 aa28.36■■■□□ 2.13
COL13A1-210ENST00000517713 PRAMEF19Q5SWL8 479 aa28.36■■■□□ 2.13
COL13A1-210ENST00000517713 GDAP1L1Q96MZ0 367 aa28.36■■■□□ 2.13
COL13A1-210ENST00000517713 NAP1L3Q99457 506 aaPredicted RBP28.36■■■□□ 2.13
COL13A1-210ENST00000517713 ACBD3Q9H3P7 528 aa28.36■■■□□ 2.13
COL13A1-210ENST00000517713 DYNC1LI2O43237 492 aaPredicted RBP28.35■■■□□ 2.13
COL13A1-210ENST00000517713 CFHP08603 1231 aa28.35■■■□□ 2.13
COL13A1-210ENST00000517713 STAG3L1P0CL83 205 aa28.35■■■□□ 2.13
COL13A1-210ENST00000517713 ITGA4P13612 1032 aa28.35■■■□□ 2.13
COL13A1-210ENST00000517713 OAS2P29728 719 aaKnown RBP28.35■■■□□ 2.13
COL13A1-210ENST00000517713 EPHB4P54760 987 aa28.35■■■□□ 2.13
COL13A1-210ENST00000517713 TAF1CQ15572 869 aaPredicted RBP28.35■■■□□ 2.13
COL13A1-210ENST00000517713 CLUL1Q15846 466 aa28.35■■■□□ 2.13
COL13A1-210ENST00000517713 ZNF699Q32M78 642 aa28.35■■■□□ 2.13
COL13A1-210ENST00000517713 KRT35Q92764 455 aa28.35■■■□□ 2.13
COL13A1-210ENST00000517713 SCLT1Q96NL6 688 aa28.35■■■□□ 2.13
COL13A1-210ENST00000517713 PLEKHA4Q9H4M7 779 aa28.35■■■□□ 2.13
COL13A1-210ENST00000517713 ARF4P18085 180 aaPredicted RBP28.35■■■□□ 2.13
COL13A1-210ENST00000517713 ZNF211Q13398 564 aaPredicted RBP28.35■■■□□ 2.13
COL13A1-210ENST00000517713 KIAA0319LQ8IZA0 1049 aa28.35■■■□□ 2.13
COL13A1-210ENST00000517713 CD101Q93033 1021 aa28.35■■■□□ 2.13
COL13A1-210ENST00000517713 ZCCHC17Q9NP64 241 aaKnown RBP28.35■■■□□ 2.13
COL13A1-210ENST00000517713 SART1O43290 800 aaKnown RBP28.34■■■□□ 2.13
COL13A1-210ENST00000517713 ILDR2Q71H61 639 aa28.34■■■□□ 2.13
COL13A1-210ENST00000517713 MON1BQ7L1V2 547 aa28.34■■■□□ 2.13
COL13A1-210ENST00000517713 PASD1Q8IV76 773 aa28.34■■■□□ 2.13
COL13A1-210ENST00000517713 DDX47Q9H0S4 455 aaKnown RBP28.34■■■□□ 2.13
COL13A1-210ENST00000517713 XYLT2Q9H1B5 865 aa28.34■■■□□ 2.13
COL13A1-210ENST00000517713 ZSCAN5CA6NGD5 496 aaPredicted RBP28.33■■■□□ 2.13
COL13A1-210ENST00000517713 LACTBL1A8MY62 500 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 SPOPO43791 374 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 PEX5P50542 639 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 NOMO3P69849 1222 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 CISHQ9NSE2 258 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 SETD4Q9NVD3 440 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 HPCAL4Q9UM19 191 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 TRPM7Q96QT4 1865 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 RRN3P2A6NIE6 340 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 CD58P19256 250 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 RRM1P23921 792 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 MARCKSL1P49006 195 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 POU5F1Q01860 360 aaKnown RBP28.33■■■□□ 2.13
COL13A1-210ENST00000517713 IRF5Q13568 498 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 ZNF606Q8WXB4 792 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 SLITRK6Q9H5Y7 841 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 FLRT1Q9NZU1 646 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 ANAPC7Q9UJX3 599 aa28.33■■■□□ 2.13
COL13A1-210ENST00000517713 GNEQ9Y223 722 aaKnown RBP28.33■■■□□ 2.13
COL13A1-210ENST00000517713 MGAMO43451 1857 aa28.32■■■□□ 2.12
COL13A1-210ENST00000517713 A6NJR5 290 aa28.32■■■□□ 2.12
COL13A1-210ENST00000517713 CTNNA2P26232 953 aa28.32■■■□□ 2.12
COL13A1-210ENST00000517713 SSTR3P32745 418 aaPredicted RBP28.32■■■□□ 2.12
COL13A1-210ENST00000517713 CARSP49589 748 aaKnown RBP28.32■■■□□ 2.12
COL13A1-210ENST00000517713 GABPB1Q06547 395 aaPredicted RBP28.32■■■□□ 2.12
COL13A1-210ENST00000517713 CHADLQ6NUI6 762 aa28.32■■■□□ 2.12
COL13A1-210ENST00000517713 PPP1R2P3Q6NXS1 205 aa28.32■■■□□ 2.12
COL13A1-210ENST00000517713 EMBQ6PCB8 327 aa28.32■■■□□ 2.12
COL13A1-210ENST00000517713 SND1Q7KZF4 910 aaKnown RBP eCLIP28.32■■■□□ 2.12
COL13A1-210ENST00000517713 ZNF410Q86VK4 478 aa28.32■■■□□ 2.12
COL13A1-210ENST00000517713 ESYT3A0FGR9 886 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 CCDC66A2RUB6 948 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 H3BQF6 201 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 TSPAN1O60635 241 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 ERLIN2O94905 339 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 NFICP08651 508 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 CTNNA1P35221 906 aaKnown RBP28.31■■■□□ 2.12
COL13A1-210ENST00000517713 KYAT1Q16773 422 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 LIN9Q5TKA1 542 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 CASKIN2Q8WXE0 1202 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 IFT81Q8WYA0 676 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 PCDHA3Q9Y5H8 950 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 MROH7Q68CQ1 1323 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 KRT19P08727 400 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 PAK2Q13177 524 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 PHF13Q86YI8 300 aaPredicted RBP28.31■■■□□ 2.12
COL13A1-210ENST00000517713 CPNE8Q86YQ8 564 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 VCPIP1Q96JH7 1222 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 ADAM22Q9P0K1 906 aa28.31■■■□□ 2.12
COL13A1-210ENST00000517713 MEFVO15553 781 aaPredicted RBP28.3■■■□□ 2.12
COL13A1-210ENST00000517713 WEE2P0C1S8 567 aa28.3■■■□□ 2.12
COL13A1-210ENST00000517713 ASPAP45381 313 aa28.3■■■□□ 2.12
COL13A1-210ENST00000517713 C2CD6Q53TS8 623 aa28.3■■■□□ 2.12
COL13A1-210ENST00000517713 SMYD5Q6GMV2 418 aa28.3■■■□□ 2.12
COL13A1-210ENST00000517713 JADE1Q6IE81 842 aa28.3■■■□□ 2.12
COL13A1-210ENST00000517713 SCARA5Q6ZMJ2 495 aa28.3■■■□□ 2.12
COL13A1-210ENST00000517713 PHLDB2Q86SQ0 1253 aa28.3■■■□□ 2.12
COL13A1-210ENST00000517713 CCDC26Q8TAB7 109 aa28.3■■■□□ 2.12
COL13A1-210ENST00000517713 CAVIN3Q969G5 261 aa28.3■■■□□ 2.12
COL13A1-210ENST00000517713 ASB7Q9H672 318 aa28.3■■■□□ 2.12
COL13A1-210ENST00000517713 SIX4Q9UIU6 781 aa28.3■■■□□ 2.12
COL13A1-210ENST00000517713 POLR3GO15318 223 aaPredicted RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms