RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 PLA2G5P39877 138 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 NEK2P51955 445 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 EXOSC10Q01780 885 aaKnown RBP6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 GADL1Q6ZQY3 521 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 ZBTB46Q86UZ6 589 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 MIER2Q8N344 545 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 LCORLQ8N3X6 602 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 NSUN7Q8NE18 718 aaKnown RBP6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 TMIEQ8NEW7 156 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 IL17RDQ8NFM7 739 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 NUP133Q8WUM0 1156 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 CHMP4CQ96CF2 233 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 KLHL32Q96NJ5 620 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 CYP4F11Q9HBI6 524 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 RNF181Q9P0P0 153 aa6.85□□□□□ -1.31
SCARNA1-201ENST00000517138 SALL3Q9BXA9 1300 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 NT5C1B-RDH14C9J2C7 533 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 F2RL2O00254 374 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 SLC43A1O75387 559 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 MALP21145 153 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 RAB39AQ14964 217 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 GEN1Q17RS7 908 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 TMEM240Q5SV17 173 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 PRR18Q8N4B5 295 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 LINC00476Q8WZB0 136 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 HOOK2Q96ED9 719 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 LRIG1Q96JA1 1093 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 DDX56Q9NY93 547 aaKnown RBP6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 CALCOCO1Q9P1Z2 691 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 KCNE5Q9UJ90 142 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 CDYLQ9Y232 598 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 MTO1Q9Y2Z2 717 aaKnown RBP6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 NOX1Q9Y5S8 564 aa6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 CFAP20Q9Y6A4 193 aaKnown RBP6.84□□□□□ -1.31
SCARNA1-201ENST00000517138 IL33O95760 270 aa6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 FOSP01100 380 aaPredicted RBP6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 MTHFD1P11586 935 aaKnown RBP6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 PPP4R3AQ6IN85 833 aa6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 SLC44A3Q8N4M1 653 aa6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 NLGN4YQ8NFZ3 816 aaPredicted RBP6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 Q96MF0 132 aa6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 PNKPQ96T60 521 aa6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 C1orf43Q9BWL3 253 aa6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 GTPBP4Q9BZE4 634 aaKnown RBP6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 UNKLQ9H9P5 680 aaKnown RBP6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 TMEM74BQ9NUR3 256 aa6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 JKAMPQ9P055 326 aa6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 C11orf21Q9P2W6 132 aa6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 IP6K2Q9UHH9 426 aa6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 PACSIN3Q9UKS6 424 aa6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 PCDHA3Q9Y5H8 950 aa6.83□□□□□ -1.32
SCARNA1-201ENST00000517138 ARHGEF17Q96PE2 2063 aaPredicted RBP6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 PRSS29PA6NIE9 313 aa6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 ERN1O75460 977 aaKnown RBP6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 POU2F2P09086 479 aa6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 SEC24CP53992 1094 aa6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 ATP2B3Q16720 1220 aa6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 SPDYE7PQ495Y7 208 aa6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 SLC4A10Q6U841 1118 aa6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 ZNF365Q70YC5 407 aa6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 TTC7BQ86TV6 843 aa6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 HSPBAP1Q96EW2 488 aa6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 BOD1Q96IK1 185 aa6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 PACSIN1Q9BY11 444 aa6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 AASDHPPTQ9NRN7 309 aa6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 MRPS18AQ9NVS2 196 aaKnown RBP6.82□□□□□ -1.32
SCARNA1-201ENST00000517138 E9PLN8 166 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 ALDH1L1O75891 902 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 PDGFRBP09619 1106 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 PHKA1P46020 1223 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 ANAPC15P60006 121 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 MCL1Q07820 350 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 ABHD17BQ5VST6 288 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 FOXR2Q6PJQ5 311 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 USP45Q70EL2 814 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 PDPRQ8NCN5 879 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 SLC17A8Q8NDX2 589 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 FBXO41Q8TF61 875 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 FUBP1Q96AE4 644 aaKnown RBP6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 VKORC1Q9BQB6 163 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 IMPG2Q9BZV3 1241 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 TOR3AQ9H497 397 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 SYNPO2LQ9H987 977 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 GALNT9Q9HCQ5 603 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 CTTNBP2NLQ9P2B4 639 aa6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 TESQ9UGI8 421 aaKnown RBP6.81□□□□□ -1.32
SCARNA1-201ENST00000517138 PF4V1P10720 104 aa6.8□□□□□ -1.32
SCARNA1-201ENST00000517138 ADRA1BP35368 520 aa6.8□□□□□ -1.32
SCARNA1-201ENST00000517138 MPLP40238 635 aa6.8□□□□□ -1.32
SCARNA1-201ENST00000517138 VAV2P52735 878 aa6.8□□□□□ -1.32
SCARNA1-201ENST00000517138 USP14P54578 494 aa6.8□□□□□ -1.32
SCARNA1-201ENST00000517138 MC2RQ01718 297 aa6.8□□□□□ -1.32
SCARNA1-201ENST00000517138 TTF1Q15361 905 aaPredicted RBP6.8□□□□□ -1.32
SCARNA1-201ENST00000517138 CCDC93Q567U6 631 aa6.8□□□□□ -1.32
SCARNA1-201ENST00000517138 FAM43AQ8N2R8 423 aa6.8□□□□□ -1.32
SCARNA1-201ENST00000517138 SUPT20HQ8NEM7 779 aa6.8□□□□□ -1.32
SCARNA1-201ENST00000517138 CAVIN3Q969G5 261 aa6.8□□□□□ -1.32
SCARNA1-201ENST00000517138 ABLIM3O94929 683 aa6.79□□□□□ -1.32
SCARNA1-201ENST00000517138 HKR1P10072 659 aa6.79□□□□□ -1.32
SCARNA1-201ENST00000517138 TYRP1P17643 537 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms