RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 DNAJC10Q8IXB1 793 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 NLGN4YQ8NFZ3 816 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 ZCRB1Q8TBF4 217 aaKnown RBP4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 NUP133Q8WUM0 1156 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 LINC00476Q8WZB0 136 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 NACC2Q96BF6 587 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 GPATCH3Q96I76 525 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 MRGPRX4Q96LA9 322 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 PNKPQ96T60 521 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 GALNT9Q9HCQ5 603 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 HOMER2Q9NSB8 354 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 ZNHIT2Q9UHR6 403 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 SLC45A2Q9UMX9 530 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 PCDHB1Q9Y5F3 818 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 EPN1Q9Y6I3 576 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 COL4A3Q01955 1670 aa4.25□□□□□ -1.73
SNORA40.12-201ENST00000516329 ANKRD62A6NC57 917 aa4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 LRRC14BA6NHZ5 514 aa4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 ZRANB2O95218 330 aaKnown RBP eCLIP4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 ADKP55263 362 aaKnown RBP4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 FOXI1Q12951 378 aa4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 RAB39AQ14964 217 aa4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 FLYWCH1Q4VC44 716 aa4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 BRDTQ58F21 947 aaPredicted RBP4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 UTP14CQ5TAP6 766 aaKnown RBP4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 PPP4R3AQ6IN85 833 aa4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 FAM43AQ8N2R8 423 aa4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 CRAMP1Q96RY5 1269 aa4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 VRK1Q99986 396 aaPredicted RBP4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 SLC13A1Q9BZW2 595 aa4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 CASS4Q9NQ75 786 aa4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 TBCCD1Q9NVR7 557 aa4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 CFAP20Q9Y6A4 193 aaKnown RBP4.24□□□□□ -1.73
SNORA40.12-201ENST00000516329 KIAA0355O15063 1070 aa4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 TGM1P22735 817 aa4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 VAV2P52735 878 aa4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 MPP3Q13368 585 aa4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 KHDC1Q4VXA5 237 aaKnown RBP4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 OLFML1Q6UWY5 402 aa4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 ZNF365Q70YC5 407 aa4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 MIER2Q8N344 545 aa4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 NSUN7Q8NE18 718 aaKnown RBP4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 NSUN6Q8TEA1 469 aaKnown RBP4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 TMEM125Q96AQ2 219 aa4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 PTCD3Q96EY7 689 aaKnown RBP4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 COQ10AQ96MF6 247 aa4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 KLHL32Q96NJ5 620 aa4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 DMRTA2Q96SC8 542 aa4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 IMPG2Q9BZV3 1241 aa4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 RIOX1Q9H6W3 641 aa4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 UNKLQ9H9P5 680 aaKnown RBP4.23□□□□□ -1.73
SNORA40.12-201ENST00000516329 TRGV11A0A075B6L2 103 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 PPFIA2O75334 1257 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 SNUPNO95149 360 aaKnown RBP4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 RPLP2P05387 115 aaKnown RBP4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 TYRP1P17643 537 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 CXCR5P32302 372 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 BLOC1S1P78537 153 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 SLC4A10Q6U841 1118 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 ZBTB46Q86UZ6 589 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 COLGALT2Q8IYK4 626 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 TMIEQ8NEW7 156 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 SSH3Q8TE77 659 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 BOD1Q96IK1 185 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 MED15Q96RN5 788 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 AIFM2Q9BRQ8 373 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 SYNPO2LQ9H987 977 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 SLAMF7Q9NQ25 335 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 TMEM74BQ9NUR3 256 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 VSX1Q9NZR4 365 aaPredicted RBP4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 JKAMPQ9P055 326 aa4.22□□□□□ -1.73
SNORA40.12-201ENST00000516329 SALL3Q9BXA9 1300 aa4.21□□□□□ -1.73
SNORA40.12-201ENST00000516329 SLC43A1O75387 559 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 ESRRBO95718 433 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 IL33O95760 270 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 MALP21145 153 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 IBSPP21815 317 aaPredicted RBP4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 ADRA1BP35368 520 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 MPLP40238 635 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 RECQLP46063 649 aaPredicted RBP4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 PSMC1P62191 440 aaKnown RBP4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 MC2RQ01718 297 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 DSC2Q02487 901 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 ZNF844Q08AG5 666 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 SNAPC2Q13487 334 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 PREPLQ4J6C6 727 aaPredicted RBP4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 Q6ZNX1 250 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 TTC7BQ86TV6 843 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 PDPRQ8NCN5 879 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 SLC17A8Q8NDX2 589 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 IL17RDQ8NFM7 739 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 CALCOCO1Q9P1Z2 691 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 LUC7L2Q9Y383 392 aaKnown RBP4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 MAST3O60307 1309 aa4.21□□□□□ -1.74
SNORA40.12-201ENST00000516329 ZAR1LA6NP61 321 aa4.2□□□□□ -1.74
SNORA40.12-201ENST00000516329 F2RL2O00254 374 aa4.2□□□□□ -1.74
SNORA40.12-201ENST00000516329 TOR1BO14657 336 aa4.2□□□□□ -1.74
SNORA40.12-201ENST00000516329 KCNA2P16389 499 aa4.2□□□□□ -1.74
SNORA40.12-201ENST00000516329 SMARCA1P28370 1054 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms