RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 MTMR12Q9C0I1 747 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 METTL14Q9HCE5 456 aaKnown RBP12.86□□□□□ -0.35
SNF8-215ENST00000515572 ENTPD7Q9NQZ7 604 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 ANO10Q9NW15 660 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 R3HCC1Q9Y3T6 440 aaKnown RBP12.86□□□□□ -0.35
SNF8-215ENST00000515572 IRAK3Q9Y616 596 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 MTCH2Q9Y6C9 303 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 SCN1AP35498 2009 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 VWA8A3KMH1 1905 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 PTPRJQ12913 1337 aa12.86□□□□□ -0.35
SNF8-215ENST00000515572 ARHGEF37A1IGU5 675 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 FSD2A1L4K1 749 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 LRRIQ3A6PVS8 624 aaPredicted RBP12.85□□□□□ -0.35
SNF8-215ENST00000515572 F8W810 466 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 STX10O60499 249 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 ITGB3P05106 788 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 URODP06132 367 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 GLUD2P49448 558 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 GUCY2FP51841 1108 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 ERVFC1P60507 584 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 RBP5P82980 135 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 USP41Q3LFD5 358 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 FAM171A1Q5VUB5 890 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 KIAA1841Q6NSI8 718 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 PDXDC1Q6P996 788 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 CD300LGQ6UXG3 332 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.85□□□□□ -0.35
SNF8-215ENST00000515572 FRMD5Q7Z6J6 570 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 FILIP1Q7Z7B0 1213 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 LRRC52Q8N7C0 313 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 C1orf127Q8N9H9 656 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 C3orf58Q8NDZ4 430 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 OR5B17Q8NGF7 314 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 EEF2KMTQ96G04 330 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 BORCS6Q96GS4 357 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 ZNF560Q96MR9 790 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 GPR62Q9BZJ7 368 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 GZF1Q9H116 711 aaPredicted RBP12.85□□□□□ -0.35
SNF8-215ENST00000515572 ZBP1Q9H171 429 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 NSUN3Q9H649 340 aaKnown RBP12.85□□□□□ -0.35
SNF8-215ENST00000515572 MRPL17Q9NRX2 175 aaKnown RBP12.85□□□□□ -0.35
SNF8-215ENST00000515572 CHST7Q9NS84 486 aa12.85□□□□□ -0.35
SNF8-215ENST00000515572 SYN3O14994 580 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 GTF2H1P32780 548 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 AARSP49588 968 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNF8-215ENST00000515572 TAF6P49848 677 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 STX17P56962 302 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 LILRA4P59901 499 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 DSG1Q02413 1049 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 CREMQ03060 361 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 NFKBIBQ15653 356 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 SV2CQ496J9 727 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 TRAPPC11Q7Z392 1133 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 MRPL43Q8N983 215 aaKnown RBP12.84□□□□□ -0.35
SNF8-215ENST00000515572 PLEKHO2Q8TD55 490 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 SUSD3Q96L08 255 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 POP1Q99575 1024 aaKnown RBP12.84□□□□□ -0.35
SNF8-215ENST00000515572 TTPALQ9BTX7 342 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNF8-215ENST00000515572 ARMCX3Q9UH62 379 aaPredicted RBP12.84□□□□□ -0.35
SNF8-215ENST00000515572 AGAP1Q9UPQ3 857 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 STXBP5LQ9Y2K9 1186 aa12.84□□□□□ -0.35
SNF8-215ENST00000515572 PRRC2BQ5JSZ5 2229 aaKnown RBP12.83□□□□□ -0.36
SNF8-215ENST00000515572 C2orf71A6NGG8 1288 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 M0QZQ0 153 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 PHACTR2O75167 634 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 CXCL14O95715 111 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 KRT19P08727 400 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 CCDC192P0DO97 292 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 FGFR3P22607 806 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 POLR2BP30876 1174 aaKnown RBP12.83□□□□□ -0.36
SNF8-215ENST00000515572 IRS1P35568 1242 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 BRCC3P46736 316 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 MARSP56192 900 aaKnown RBP12.83□□□□□ -0.36
SNF8-215ENST00000515572 DLG4P78352 724 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 TYRO3Q06418 890 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 MYO1EQ12965 1108 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 TRPC3Q13507 836 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 TPD52L1Q16890 204 aaPredicted RBP12.83□□□□□ -0.36
SNF8-215ENST00000515572 ZACNQ401N2 412 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 CCDC40Q4G0X9 1142 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 KIAA0319Q5VV43 1072 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 PLPP4Q5VZY2 271 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 LMBRD2Q68DH5 695 aaPredicted RBP12.83□□□□□ -0.36
SNF8-215ENST00000515572 DSTYKQ6XUX3 929 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 TAS1R1Q7RTX1 841 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 APPL2Q8NEU8 664 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 CXorf38Q8TB03 319 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 PIK3R5Q8WYR1 880 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 ZNF516Q92618 1163 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 CDCA3Q99618 268 aaPredicted RBP12.83□□□□□ -0.36
SNF8-215ENST00000515572 SRRTQ9BXP5 876 aaKnown RBP12.83□□□□□ -0.36
SNF8-215ENST00000515572 EMILIN2Q9BXX0 1053 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 SIX4Q9UIU6 781 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 PCDHB8Q9UN66 801 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 TSC2P49815 1807 aa12.83□□□□□ -0.36
SNF8-215ENST00000515572 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.82□□□□□ -0.36
SNF8-215ENST00000515572 KPNA7A9QM74 516 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 PPEF2O14830 753 aa12.82□□□□□ -0.36
SNF8-215ENST00000515572 NCK2O43639 380 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms