RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ACTN4O43707 911 aaKnown RBP12.47□□□□□ -0.41
VCAN-212ENST00000515397 ZMYND10O75800 440 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 C8AP07357 584 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 PFKFB1P16118 471 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 SCP2P22307 547 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 LRPAP1P30533 357 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 AMPD3Q01432 767 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 RAB33AQ14088 237 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 BECN1Q14457 450 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 TMEM132DQ14C87 1099 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 KYAT1Q16773 422 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 CTXN3Q4LDR2 81 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 SPATA1Q5VX52 437 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 C9orf57Q5W0N0 161 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 LMBRD2Q68DH5 695 aaPredicted RBP12.47□□□□□ -0.41
VCAN-212ENST00000515397 DSTYKQ6XUX3 929 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 ANKS3Q6ZW76 656 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 GRASPQ7Z6J2 395 aaPredicted RBP12.47□□□□□ -0.41
VCAN-212ENST00000515397 EFCAB13Q8IY85 973 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 GPR65Q8IYL9 337 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 BEST2Q8NFU1 509 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 SLC7A14Q8TBB6 771 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 HVCN1Q96D96 273 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 PAGE5Q96GU1 130 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 PRKD2Q9BZL6 878 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 CUEDC2Q9H467 287 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 HCFC1R1Q9NWW0 138 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 FBXL5Q9UKA1 691 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 FBXW11Q9UKB1 542 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 NR2E1Q9Y466 385 aa12.47□□□□□ -0.41
VCAN-212ENST00000515397 WDR27A2RRH5 827 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 GPR37L1O60883 481 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 SEC24AO95486 1093 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 OR4Q2P0C623 313 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 CYP3A5P20815 502 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 CMA1P23946 247 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 GBP2P32456 591 aaPredicted RBP12.46□□□□□ -0.41
VCAN-212ENST00000515397 ABCD1P33897 745 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 NDUFA8P51970 172 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 ZXDAP98168 799 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 TFAMQ00059 246 aaKnown RBP12.46□□□□□ -0.41
VCAN-212ENST00000515397 ROR1Q01973 937 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 CREMQ03060 361 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 MRPL58Q14197 206 aaKnown RBP12.46□□□□□ -0.41
VCAN-212ENST00000515397 POSTNQ15063 836 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 FAM26FQ5R3K3 315 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 PPM1LQ5SGD2 360 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 C15orf39Q6ZRI6 1047 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 CCDC149Q6ZUS6 474 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 UNC13DQ70J99 1090 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 CEP57L1Q8IYX8 460 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 TDRD5Q8NAT2 981 aaKnown RBP12.46□□□□□ -0.41
VCAN-212ENST00000515397 RDH13Q8NBN7 331 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 CMASQ8NFW8 434 aaPredicted RBP12.46□□□□□ -0.41
VCAN-212ENST00000515397 RSAD2Q8WXG1 361 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 EDAQ92838 391 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 MYADMQ96S97 322 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 TMEM209Q96SK2 561 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 LRRC27Q9C0I9 530 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 GOLPH3LQ9H4A5 285 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 PDE11AQ9HCR9 933 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 WDR6Q9NNW5 1121 aaKnown RBP12.46□□□□□ -0.41
VCAN-212ENST00000515397 DPP3Q9NY33 737 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 BACE2Q9Y5Z0 518 aa12.46□□□□□ -0.41
VCAN-212ENST00000515397 MYH15Q9Y2K3 1946 aa12.46□□□□□ -0.42
VCAN-212ENST00000515397 TECTAO75443 2155 aa12.46□□□□□ -0.42
VCAN-212ENST00000515397 SYN3O14994 580 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 TBC1D4O60343 1298 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 SLFN14P0C7P3 912 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 PRR29P0C7W0 189 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 CYP2J2P51589 502 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 LILRA4P59901 499 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 LIN9Q5TKA1 542 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 ARMCX5Q6P1M9 558 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 PDXDC1Q6P996 788 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 HFE2Q6ZVN8 426 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 GET4Q7L5D6 327 aaPredicted RBP12.45□□□□□ -0.42
VCAN-212ENST00000515397 EPM2AIP1Q7L775 607 aaPredicted RBP12.45□□□□□ -0.42
VCAN-212ENST00000515397 CBWD2Q8IUF1 395 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 CD302Q8IX05 232 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 APPL2Q8NEU8 664 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 ZNF507Q8TCN5 953 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 HDAC7Q8WUI4 952 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 SCFD1Q8WVM8 642 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 SENP8Q96LD8 212 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 PGLYRP2Q96PD5 576 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 ASB7Q9H672 318 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 TMEM206Q9H813 350 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 CYP4F11Q9HBI6 524 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 RBAKQ9NYW8 714 aaPredicted RBP12.45□□□□□ -0.42
VCAN-212ENST00000515397 DPP7Q9UHL4 492 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 PCDHB8Q9UN66 801 aa12.45□□□□□ -0.42
VCAN-212ENST00000515397 CLUHO75153 1309 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 ANO9A1A5B4 782 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 H7C4K7 107 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 M0QZQ0 153 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 PIRO00625 290 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 TGFB1I1O43294 461 aa12.44□□□□□ -0.42
VCAN-212ENST00000515397 XPOTO43592 962 aaKnown RBP12.44□□□□□ -0.42
VCAN-212ENST00000515397 KLRC4O43908 158 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms