RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 RNF219Q5W0B1 726 aaPredicted RBP4.59□□□□□ -1.67
CAST-242ENST00000515063 DRICH1Q6PGQ1 229 aaPredicted RBP4.59□□□□□ -1.67
CAST-242ENST00000515063 ATF7IPQ6VMQ6 1270 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 NRKQ7Z2Y5 1582 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 UBR1Q8IWV7 1749 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 TOPAZ1Q8N9V7 1692 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 CPT1CQ8TCG5 803 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 LENG9Q96B70 501 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 AHCYL2Q96HN2 611 aaKnown RBP4.59□□□□□ -1.67
CAST-242ENST00000515063 KIF16BQ96L93 1317 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 LRRC7Q96NW7 1537 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 NDC1Q9BTX1 674 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 SLC2A4RGQ9NR83 387 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 EDARQ9UNE0 448 aa4.59□□□□□ -1.67
CAST-242ENST00000515063 NALCNQ8IZF0 1738 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 RIMS1Q86UR5 1692 aaKnown RBP4.58□□□□□ -1.68
CAST-242ENST00000515063 PIK3R4Q99570 1358 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 GAGE12BA1L429 117 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 GAGE12HA6NDE8 117 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 GPR39O43194 453 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 SUV39H1O43463 412 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 AKR1B10O60218 316 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 FAM20BO75063 409 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 ITGB1P05556 798 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 SPATA31D3P0C874 917 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 ECHS1P30084 290 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 DEKP35659 375 aaKnown RBP4.58□□□□□ -1.68
CAST-242ENST00000515063 FLT3LGP49771 235 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 SLC25A3Q00325 362 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 CDK17Q00537 523 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 BECN1Q14457 450 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 PTPROQ16827 1216 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 MUM1Q2TAK8 710 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 MST1LQ2TV78 715 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 MUM1L1Q5H9M0 696 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 IGFL4Q6B9Z1 124 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 EFCAB12Q6NXP0 572 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 ABHD15Q6UXT9 468 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 SPATA31D4Q6ZUB0 917 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 GPR156Q8NFN8 814 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 ATL2Q8NHH9 583 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 ZFP28Q8NHY6 868 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 LMBR1Q8WVP7 490 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 ORAI2Q96SN7 254 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 LSM14BQ9BX40 385 aaKnown RBP4.58□□□□□ -1.68
CAST-242ENST00000515063 SLC46A2Q9BY10 475 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 ACE2Q9BYF1 805 aaPredicted RBP4.58□□□□□ -1.68
CAST-242ENST00000515063 QRSL1Q9H0R6 528 aaKnown RBP4.58□□□□□ -1.68
CAST-242ENST00000515063 KCNH6Q9H252 994 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 UPF2Q9HAU5 1272 aaKnown RBP4.58□□□□□ -1.68
CAST-242ENST00000515063 BCO1Q9HAY6 547 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 IFT122Q9HBG6 1241 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 SPON1Q9HCB6 807 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 STK26Q9P289 416 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 POLKQ9UBT6 870 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 ING1Q9UK53 422 aaPredicted RBP4.58□□□□□ -1.68
CAST-242ENST00000515063 FZD1Q9UP38 647 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 DLG5Q8TDM6 1919 aa4.58□□□□□ -1.68
CAST-242ENST00000515063 DIP2AQ14689 1571 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 PTCH1Q13635 1447 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 TNRQ92752 1358 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 TMEM2Q9UHN6 1383 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 PLEKHG1Q9ULL1 1385 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 hCG_2014768A0A024R1R8 64 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 PJA2O43164 708 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 RPS6KA4O75676 772 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 EYA4O95677 639 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 CFBP00751 764 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 ZNF853P0CG23 659 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 RBP3P10745 1247 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 TNNT2P45379 298 aaPredicted RBP4.57□□□□□ -1.68
CAST-242ENST00000515063 RIPK4P57078 832 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 SCAND1P57086 179 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 GNAI1P63096 354 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 MXRA7P84157 204 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 EXOSC9Q06265 439 aaKnown RBP4.57□□□□□ -1.68
CAST-242ENST00000515063 PTPAQ15257 358 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 ADRM1Q16186 407 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 KCNV1Q6PIU1 500 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 LRRC55Q6ZSA7 311 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 GPRIN1Q7Z2K8 1008 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 MRGPRGQ86SM5 289 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 PLXDC1Q8IUK5 500 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 SMC5Q8IY18 1101 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 FTSJ3Q8IY81 847 aaKnown RBP4.57□□□□□ -1.68
CAST-242ENST00000515063 SSH1Q8WYL5 1049 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 RIN2Q8WYP3 895 aaPredicted RBP4.57□□□□□ -1.68
CAST-242ENST00000515063 CHFRQ96EP1 664 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 UHRF1Q96T88 793 aaPredicted RBP4.57□□□□□ -1.68
CAST-242ENST00000515063 ADI1Q9BV57 179 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 CPEB1Q9BZB8 566 aaKnown RBP4.57□□□□□ -1.68
CAST-242ENST00000515063 PRDM12Q9H4Q4 367 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 GREM2Q9H772 168 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 SMC4Q9NTJ3 1288 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 C14orf119Q9NWQ9 140 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 MOCS1Q9NZB8 636 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 RRP7AQ9Y3A4 280 aaKnown RBP4.57□□□□□ -1.68
CAST-242ENST00000515063 COL4A3BPQ9Y5P4 624 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 USP54Q70EL1 1684 aa4.57□□□□□ -1.68
CAST-242ENST00000515063 SLIT1O75093 1534 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms