RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 TKTP29401 623 aaKnown RBP15.1■□□□□ 0.01
USP46-209ENST00000514536 NDUFV1P49821 464 aa15.1■□□□□ 0.01
USP46-209ENST00000514536 CYP24A1Q07973 514 aa15.1■□□□□ 0.01
USP46-209ENST00000514536 SURF1Q15526 300 aa15.1■□□□□ 0.01
USP46-209ENST00000514536 LMBRD2Q68DH5 695 aaPredicted RBP15.1■□□□□ 0.01
USP46-209ENST00000514536 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.1■□□□□ 0.01
USP46-209ENST00000514536 GTPBP4Q9BZE4 634 aaKnown RBP15.1■□□□□ 0.01
USP46-209ENST00000514536 RXFP1Q9HBX9 757 aa15.1■□□□□ 0.01
USP46-209ENST00000514536 TTC28Q96AY4 2481 aa15.09■□□□□ 0.01
USP46-209ENST00000514536 ANO9A1A5B4 782 aa15.09■□□□□ 0.01
USP46-209ENST00000514536 GOLGA6L22H0YM25 854 aa15.09■□□□□ 0.01
USP46-209ENST00000514536 H3BQ06 376 aaPredicted RBP15.09■□□□□ 0.01
USP46-209ENST00000514536 PIRO00625 290 aa15.09■□□□□ 0.01
USP46-209ENST00000514536 TEX28O15482 410 aa15.09■□□□□ 0.01
USP46-209ENST00000514536 KCNC3Q14003 757 aa15.09■□□□□ 0.01
USP46-209ENST00000514536 MYBPC2Q14324 1141 aa15.09■□□□□ 0.01
USP46-209ENST00000514536 PSMD6Q15008 389 aa15.09■□□□□ 0.01
USP46-209ENST00000514536 GLYCTKQ8IVS8 523 aa15.09■□□□□ 0.01
USP46-209ENST00000514536 GPR65Q8IYL9 337 aa15.09■□□□□ 0.01
USP46-209ENST00000514536 LNX1Q8TBB1 728 aaPredicted RBP15.09■□□□□ 0.01
USP46-209ENST00000514536 SLC22A17Q8WUG5 538 aa15.09■□□□□ 0.01
USP46-209ENST00000514536 CCDC127Q96BQ5 260 aa15.09■□□□□ 0.01
USP46-209ENST00000514536 MFSD14AQ96MC6 490 aa15.09■□□□□ 0.01
USP46-209ENST00000514536 POP1Q99575 1024 aaKnown RBP15.09■□□□□ 0.01
USP46-209ENST00000514536 CLEC1BQ9P126 229 aa15.09■□□□□ 0.01
USP46-209ENST00000514536 BARX2Q9UMQ3 279 aaPredicted RBP15.09■□□□□ 0.01
USP46-209ENST00000514536 FSD2A1L4K1 749 aa15.08■□□□□ 0
USP46-209ENST00000514536 TBX10O75333 385 aa15.08■□□□□ 0
USP46-209ENST00000514536 TMEM191BP0C7N4 346 aa15.08■□□□□ 0
USP46-209ENST00000514536 DLATP10515 647 aaKnown RBP15.08■□□□□ 0
USP46-209ENST00000514536 CASP4P49662 377 aa15.08■□□□□ 0
USP46-209ENST00000514536 LILRA4P59901 499 aa15.08■□□□□ 0
USP46-209ENST00000514536 MRPS5P82675 430 aaKnown RBP15.08■□□□□ 0
USP46-209ENST00000514536 MORC3Q14149 939 aa15.08■□□□□ 0
USP46-209ENST00000514536 PSMD5Q16401 504 aa15.08■□□□□ 0
USP46-209ENST00000514536 COBLL1Q53SF7 1204 aa15.08■□□□□ 0
USP46-209ENST00000514536 CEP135Q66GS9 1140 aa15.08■□□□□ 0
USP46-209ENST00000514536 SCARA3Q6AZY7 606 aa15.08■□□□□ 0
USP46-209ENST00000514536 DSTYKQ6XUX3 929 aa15.08■□□□□ 0
USP46-209ENST00000514536 PPFIBP1Q86W92 1011 aa15.08■□□□□ 0
USP46-209ENST00000514536 ADSSL1Q8N142 457 aa15.08■□□□□ 0
USP46-209ENST00000514536 CSGALNACT2Q8N6G5 542 aa15.08■□□□□ 0
USP46-209ENST00000514536 C1orf127Q8N9H9 656 aa15.08■□□□□ 0
USP46-209ENST00000514536 OR5B17Q8NGF7 314 aa15.08■□□□□ 0
USP46-209ENST00000514536 TMEM174Q8WUU8 243 aa15.08■□□□□ 0
USP46-209ENST00000514536 ATXN2LQ8WWM7 1075 aaKnown RBP15.08■□□□□ 0
USP46-209ENST00000514536 PIK3R5Q8WYR1 880 aa15.08■□□□□ 0
USP46-209ENST00000514536 SUSD3Q96L08 255 aa15.08■□□□□ 0
USP46-209ENST00000514536 FNBP1Q96RU3 617 aa15.08■□□□□ 0
USP46-209ENST00000514536 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.08■□□□□ 0
USP46-209ENST00000514536 INTS13Q9NVM9 706 aa15.08■□□□□ 0
USP46-209ENST00000514536 KIAA1468Q9P260 1216 aa15.08■□□□□ 0
USP46-209ENST00000514536 HCFC2Q9Y5Z7 792 aa15.08■□□□□ 0
USP46-209ENST00000514536 ATG2AQ2TAZ0 1938 aa15.08■□□□□ 0
USP46-209ENST00000514536 MUC3AQ02505 3323 aa15.07■□□□□ 0
USP46-209ENST00000514536 TNNC2P02585 160 aa15.07■□□□□ 0
USP46-209ENST00000514536 ADH1AP07327 375 aa15.07■□□□□ 0
USP46-209ENST00000514536 TNNI1P19237 187 aa15.07■□□□□ 0
USP46-209ENST00000514536 BMP6P22004 513 aa15.07■□□□□ 0
USP46-209ENST00000514536 NR2F2P24468 414 aa15.07■□□□□ 0
USP46-209ENST00000514536 RPL13P26373 211 aaKnown RBP15.07■□□□□ 0
USP46-209ENST00000514536 ADAM9Q13443 819 aa15.07■□□□□ 0
USP46-209ENST00000514536 CLUL1Q15846 466 aa15.07■□□□□ 0
USP46-209ENST00000514536 NFIL3Q16649 462 aa15.07■□□□□ 0
USP46-209ENST00000514536 DUOXA2Q1HG44 320 aa15.07■□□□□ 0
USP46-209ENST00000514536 TMEM184AQ6ZMB5 413 aa15.07■□□□□ 0
USP46-209ENST00000514536 PALB2Q86YC2 1186 aa15.07■□□□□ 0
USP46-209ENST00000514536 ANKRD36BP1Q96IX9 119 aa15.07■□□□□ 0
USP46-209ENST00000514536 ASB2Q96Q27 587 aa15.07■□□□□ 0
USP46-209ENST00000514536 CLSTN3Q9BQT9 956 aa15.07■□□□□ 0
USP46-209ENST00000514536 MTMR12Q9C0I1 747 aa15.07■□□□□ 0
USP46-209ENST00000514536 CLSTN2Q9H4D0 955 aa15.07■□□□□ 0
USP46-209ENST00000514536 FNIP2Q9P278 1114 aa15.07■□□□□ 0
USP46-209ENST00000514536 AGAP1Q9UPQ3 857 aa15.07■□□□□ 0
USP46-209ENST00000514536 FRMD4BQ9Y2L6 1034 aa15.07■□□□□ 0
USP46-209ENST00000514536 PTPRJQ12913 1337 aa15.07■□□□□ 0
USP46-209ENST00000514536 REV3LO60673 3130 aa15.07■□□□□ 0
USP46-209ENST00000514536 SYN3O14994 580 aa15.07■□□□□ 0
USP46-209ENST00000514536 SPTLC1O15269 473 aa15.07■□□□□ 0
USP46-209ENST00000514536 ITGB3P05106 788 aa15.07■□□□□ 0
USP46-209ENST00000514536 KRT19P08727 400 aa15.07■□□□□ 0
USP46-209ENST00000514536 SRGAP2BP0DMP2 458 aa15.07■□□□□ 0
USP46-209ENST00000514536 CD44P16070 742 aaKnown RBP15.07■□□□□ 0
USP46-209ENST00000514536 EPCAMP16422 314 aa15.07■□□□□ 0
USP46-209ENST00000514536 POLR2BP30876 1174 aaKnown RBP15.07■□□□□ 0
USP46-209ENST00000514536 AARSP49588 968 aaKnown RBP eCLIP15.07■□□□□ 0
USP46-209ENST00000514536 KCNQ1P51787 676 aa15.07■□□□□ 0
USP46-209ENST00000514536 CLCN4P51793 760 aa15.07■□□□□ 0
USP46-209ENST00000514536 CREMQ03060 361 aa15.07■□□□□ 0
USP46-209ENST00000514536 STIM1Q13586 685 aa15.07■□□□□ 0
USP46-209ENST00000514536 AAK1Q2M2I8 961 aa15.07■□□□□ 0
USP46-209ENST00000514536 EDRF1Q3B7T1 1238 aa15.07■□□□□ 0
USP46-209ENST00000514536 LEXMQ3ZCV2 418 aa15.07■□□□□ 0
USP46-209ENST00000514536 ZCWPW2Q504Y3 356 aa15.07■□□□□ 0
USP46-209ENST00000514536 ANKRD40Q6AI12 368 aa15.07■□□□□ 0
USP46-209ENST00000514536 CENPPQ6IPU0 288 aa15.07■□□□□ 0
USP46-209ENST00000514536 PDXDC1Q6P996 788 aa15.07■□□□□ 0
USP46-209ENST00000514536 ANKS3Q6ZW76 656 aa15.07■□□□□ 0
USP46-209ENST00000514536 WDR49Q8IV35 697 aa15.07■□□□□ 0
USP46-209ENST00000514536 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms