RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 MSANTD3Q96H12 275 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 INO80BQ9C086 356 aaPredicted RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 NXF3Q9H4D5 531 aaKnown RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 MINDY3Q9H8M7 445 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 CYP4F11Q9HBI6 524 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 SENP2Q9HC62 589 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 SEC63Q9UGP8 760 aaKnown RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 SEPT9Q9UHD8 586 aaPredicted RBP3.64□□□□□ -1.83
CHD1-211ENST00000514344 IL17BQ9UHF5 180 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 CACNA1DQ01668 2161 aa3.64□□□□□ -1.83
CHD1-211ENST00000514344 ANTXRLA6NF34 631 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 UPK3BL1B0FP48 263 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 UPK3BL2E5RIL1 263 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 I3L4J1 428 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 DPYSL4O14531 572 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 TLX3O43711 291 aaPredicted RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 SRGAP2CP0DJJ0 459 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 C6P13671 934 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 IGFBP6P24592 240 aaPredicted RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 HOXA11P31270 313 aaPredicted RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 MLLT6P55198 1093 aaPredicted RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 RAB33AQ14088 237 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 HSP90AA2PQ14568 343 aaPredicted RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 C6orf132Q5T0Z8 1188 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 UBXN11Q5T124 520 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 TRIM68Q6AZZ1 485 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 HIST2H2BCQ6DN03 193 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 IQCEQ6IPM2 695 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 LPCAT2Q7L5N7 544 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 TMPRSS7Q7RTY8 843 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 HAUS6Q7Z4H7 955 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 MRPL10Q7Z7H8 261 aaKnown RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 GSTCDQ8NEC7 633 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 CHFRQ96EP1 664 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 RRP36Q96EU6 259 aaKnown RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 NAF1Q96HR8 494 aaKnown RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 CPB2Q96IY4 423 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 FNBP1Q96RU3 617 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 TRIM6Q9C030 488 aaPredicted RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 IFT122Q9HBG6 1241 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 SUCLA2Q9P2R7 463 aaPredicted RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 ANKMY1Q9P2S6 941 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 ERVH48-1M5A8F1 160 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 CHMP2AO43633 222 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 MOSPD3O75425 235 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 OATP04181 439 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 ATXN1LP0C7T5 689 aaKnown RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 ADSSP30520 456 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 DNM2P50570 870 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 CLDN6P56747 220 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 CAMK2BQ13554 666 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 UGCGQ16739 394 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 MCMDC2Q4G0Z9 681 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 TMEM196Q5HYL7 178 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 ARHGAP40Q5TG30 622 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 LYSMD4Q5XG99 296 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 SYT13Q7L8C5 426 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 PDCD7Q8N8D1 485 aaKnown RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 SMG9Q9H0W8 520 aaKnown RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 EBF3Q9H4W6 596 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 EBF1Q9UH73 591 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 SLC6A14Q9UN76 642 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 PCDHA10Q9Y5I2 948 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 AK5Q9Y6K8 562 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 TSC2P49815 1807 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 FAM86B1E9PN63 330 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 MEIS1O00470 390 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 ARHGAP33O14559 1287 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 DHX15O43143 795 aaKnown RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 ERLIN2O94905 339 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 PSAPP07602 524 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 FAM86B2P0C5J1 330 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 GP1BBP13224 206 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 HLA-EP13747 358 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 IL12RB1P42701 662 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 ROR1Q01973 937 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 CCDC173Q0VFZ6 552 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 NFATC3Q12968 1075 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 HNRNPDQ14103 355 aaKnown RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 SEC23AQ15436 765 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 ITPRIPL2Q3MIP1 535 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 ARHGAP29Q52LW3 1261 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 PDXDC1Q6P996 788 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 PLA2G4DQ86XP0 818 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 GPR65Q8IYL9 337 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 ELMOD1Q8N336 334 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 FAM167AQ96KS9 214 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 ZNF512Q96ME7 567 aaPredicted RBP3.63□□□□□ -1.83
CHD1-211ENST00000514344 ZNF577Q9BSK1 485 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 UBN1Q9NPG3 1134 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 ASAH2Q9NR71 780 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 HELLSQ9NRZ9 838 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 NRBP2Q9NSY0 501 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 CEP72Q9P209 647 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 PARP2Q9UGN5 583 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 PILRBQ9UKJ0 227 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 INSL5Q9Y5Q6 135 aa3.63□□□□□ -1.83
CHD1-211ENST00000514344 HELZP42694 1942 aaKnown RBP3.62□□□□□ -1.83
CHD1-211ENST00000514344 ICE1Q9Y2F5 2266 aa3.62□□□□□ -1.83
CHD1-211ENST00000514344 TNFRSF10BO14763 440 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms