RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 FAM20AQ96MK3 541 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 MYLK2Q9H1R3 596 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 BIN2Q9UBW5 565 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-205ENST00000514271 PDCD11Q14690 1871 aaKnown RBP7.92□□□□□ -1.14
CLIP1-205ENST00000514271 ANKRD63C9JTQ0 380 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 RTN3O95197 1032 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-205ENST00000514271 SGPL1O95470 568 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 IGBP1P78318 339 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 CACNB2Q08289 660 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-205ENST00000514271 KLF1Q13351 362 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-205ENST00000514271 HNRNPDQ14103 355 aaKnown RBP7.92□□□□□ -1.14
CLIP1-205ENST00000514271 DHX34Q14147 1143 aaKnown RBP7.92□□□□□ -1.14
CLIP1-205ENST00000514271 PTPROQ16827 1216 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 C1orf220Q5T0J3 134 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 SLFN12Q8IYM2 578 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 ARFGAP2Q8N6H7 521 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.92□□□□□ -1.14
CLIP1-205ENST00000514271 PRELID2Q8N945 189 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 ABHD8Q96I13 439 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 RMDN2Q96LZ7 410 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 RIT2Q99578 217 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 MXRA8Q9BRK3 442 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 ERP44Q9BS26 406 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 ROPN1BQ9BZX4 212 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-205ENST00000514271 ROPN1Q9HAT0 212 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-205ENST00000514271 POLD4Q9HCU8 107 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 COL4A3BPQ9Y5P4 624 aa7.92□□□□□ -1.14
CLIP1-205ENST00000514271 A8MUI8 341 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 SPATA31C2B4DYI2 1134 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 KBTBD13C9JR72 458 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 SLC16A3O15427 465 aaKnown RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 AP1G1O43747 822 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 UNC5CO95185 931 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 SNAI1O95863 264 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 AFPP02771 609 aaKnown RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 CYP1A1P04798 512 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 SFNP31947 248 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 USP41Q3LFD5 358 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 NAIF1Q69YI7 327 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 MAATS1Q7Z4T9 603 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 ERICH1Q86X53 443 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 TDRPQ86YL5 185 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 ETNPPLQ8TBG4 499 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 ALS2CR12Q96Q35 445 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 TRIM6Q9C030 488 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 LRRC27Q9C0I9 530 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 FAM114A2Q9NRY5 505 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 ETAA1Q9NY74 926 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 E7EVH7 732 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 USO1O60763 962 aaKnown RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 TMEM253P0C7T8 217 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 CHRNB2P17787 502 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 MCM7P33993 719 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 MAGEA1P43355 309 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 MAGOHP61326 146 aaKnown RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 IFI35P80217 286 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 TNFAIP2Q03169 654 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 COASYQ13057 564 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 HSF5Q4G112 596 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 RUFY4Q6ZNE9 571 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 CABP7Q86V35 215 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 ECHDC2Q86YB7 292 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 INPP5DQ92835 1189 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 SLC35C1Q96A29 364 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 MAGOHBQ96A72 148 aaKnown RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 RPS6KC1Q96S38 1066 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 POLR3CQ9BUI4 534 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 HTATIP2Q9BUP3 242 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 WDR11Q9BZH6 1224 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 INO80BQ9C086 356 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 LRRC19Q9H756 370 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 HOMER2Q9NSB8 354 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 ZMYND8Q9ULU4 1186 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 PHF24Q9UPV7 400 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 MAPK8IP1Q9UQF2 711 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 MYZAPP0CAP1 466 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 ATP6V1C1P21283 382 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 RGS19P49795 217 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 KRT76Q01546 638 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 ADAM9Q13443 819 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 IFI16Q16666 785 aaKnown RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 ANKRD20A2Q5SQ80 823 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 ANKRD20A1Q5TYW2 823 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 ANKRD20A3Q5VUR7 823 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 NEK8Q86SG6 692 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 KIAA1328Q86T90 577 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 FMNL3Q8IVF7 1028 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 LRRC45Q96CN5 670 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 TAAR1Q96RJ0 339 aa7.91□□□□□ -1.14
CLIP1-205ENST00000514271 PACSIN2Q9UNF0 486 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 BZW2Q9Y6E2 419 aaKnown RBP7.91□□□□□ -1.14
CLIP1-205ENST00000514271 PGRMC1O00264 195 aaKnown RBP7.9□□□□□ -1.14
CLIP1-205ENST00000514271 UBOX5O94941 541 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 NAT1P18440 290 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 TRIM21P19474 475 aaKnown RBP7.9□□□□□ -1.14
CLIP1-205ENST00000514271 RPS6KA3P51812 740 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 COPS2P61201 443 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 ARHGAP4P98171 946 aa7.9□□□□□ -1.14
CLIP1-205ENST00000514271 MAPK7Q13164 816 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms