RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 PAFAH1B1P43034 410 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 PSMC4P43686 418 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 CRYBB1P53674 252 aaPredicted RBP8.96□□□□□ -0.98
RNF4-220ENST00000513578 MYL6P60660 151 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 CENPCQ03188 943 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 TRPC3Q13507 836 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 CLUL1Q15846 466 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 TMEM132AQ24JP5 1023 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 SLC10A6Q3KNW5 377 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 TAF2Q6P1X5 1199 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 WDR93Q6P2C0 686 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 SLC27A1Q6PCB7 646 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 FBXO38Q6PIJ6 1188 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 RPAINQ86UA6 219 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 NT5DC3Q86UY8 548 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 SESTD1Q86VW0 696 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 PHF13Q86YI8 300 aaPredicted RBP8.96□□□□□ -0.98
RNF4-220ENST00000513578 RASGEF1CQ8N431 466 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 CEP120Q8N960 986 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 TRPV1Q8NER1 839 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 ACTRT1Q8TDG2 376 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 COG1Q8WTW3 980 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 ARHGEF26Q96DR7 871 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 ACAP3Q96P50 834 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 ZIC5Q96T25 663 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 MTG1Q9BT17 334 aaPredicted RBP8.96□□□□□ -0.98
RNF4-220ENST00000513578 BCO2Q9BYV7 579 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 ZNF518BQ9C0D4 1074 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 MTMR12Q9C0I1 747 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 THAP2Q9H0W7 228 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 ANKZF1Q9H8Y5 726 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 CYP3A43Q9HB55 503 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.96□□□□□ -0.98
RNF4-220ENST00000513578 AMFRQ9UKV5 643 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 PCDHB4Q9Y5E5 795 aa8.96□□□□□ -0.98
RNF4-220ENST00000513578 V9GYY5 206 aaPredicted RBP8.96□□□□□ -0.98
RNF4-220ENST00000513578 MIF4GDA9UHW6 222 aaKnown RBP8.95□□□□□ -0.98
RNF4-220ENST00000513578 ZNF185O15231 689 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 SEPT4O43236 478 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 NCK2O43639 380 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 BUB1BO60566 1050 aaPredicted RBP8.95□□□□□ -0.98
RNF4-220ENST00000513578 LSM8O95777 96 aaKnown RBP8.95□□□□□ -0.98
RNF4-220ENST00000513578 FTCDO95954 541 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 EIF4BP23588 611 aaKnown RBP8.95□□□□□ -0.98
RNF4-220ENST00000513578 CST5P28325 142 aaPredicted RBP8.95□□□□□ -0.98
RNF4-220ENST00000513578 CDH5P33151 784 aaPredicted RBP8.95□□□□□ -0.98
RNF4-220ENST00000513578 ASPAP45381 313 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 FLT3LGP49771 235 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 TFAMQ00059 246 aaKnown RBP8.95□□□□□ -0.98
RNF4-220ENST00000513578 HIC1Q14526 733 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 ZBTB6Q15916 424 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 ZNF699Q32M78 642 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 GLE1Q53GS7 698 aaKnown RBP8.95□□□□□ -0.98
RNF4-220ENST00000513578 SPOPLQ6IQ16 392 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 NOTUMQ6P988 496 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 PEX26Q7Z412 305 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 NOA1Q8NC60 698 aaKnown RBP8.95□□□□□ -0.98
RNF4-220ENST00000513578 RBBP8NLQ8NC74 664 aaPredicted RBP8.95□□□□□ -0.98
RNF4-220ENST00000513578 SPATA4Q8NEY3 305 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 TRIB2Q92519 343 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 ZNF668Q96K58 619 aaPredicted RBP8.95□□□□□ -0.98
RNF4-220ENST00000513578 ARID3AQ99856 593 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 SELENOOQ9BVL4 669 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 CCDC94Q9BW85 323 aaPredicted RBP8.95□□□□□ -0.98
RNF4-220ENST00000513578 PARD6BQ9BYG5 372 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 SPC25Q9HBM1 224 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 SEPT11Q9NVA2 429 aaKnown RBP8.95□□□□□ -0.98
RNF4-220ENST00000513578 LCMT1Q9UIC8 334 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 SIX4Q9UIU6 781 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 TMEM59LQ9UK28 342 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 ITGA11Q9UKX5 1188 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 PCDHGC3Q9UN70 934 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 COG5Q9UP83 839 aa8.95□□□□□ -0.98
RNF4-220ENST00000513578 THSD7BQ9C0I4 1608 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 FRMPD3Q5JV73 1810 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 CCDC85CA6NKD9 419 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 TMCO5BA8MYB1 307 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 DLL1O00548 723 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 DDX3YO15523 660 aaKnown RBP8.94□□□□□ -0.98
RNF4-220ENST00000513578 TREHO43280 583 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 ADAMTS4O75173 837 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 ZRANB2O95218 330 aaKnown RBP eCLIP8.94□□□□□ -0.98
RNF4-220ENST00000513578 GNRH1P01148 92 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 PAEPP09466 180 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 P4HA1P13674 534 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 ABCB4P21439 1286 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 CTNNA2P26232 953 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 GNA15P30679 374 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 CLCN6P51797 869 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 NOMO3P69849 1222 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 RBM10P98175 930 aaKnown RBP8.94□□□□□ -0.98
RNF4-220ENST00000513578 BEX3Q00994 111 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 SP3Q02447 781 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 TMEM132DQ14C87 1099 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 SNX17Q15036 470 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 KIZQ2M2Z5 673 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 XKR4Q5GH76 650 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 ZNF667Q5HYK9 610 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 CCDC181Q5TID7 509 aa8.94□□□□□ -0.98
RNF4-220ENST00000513578 TAF3Q5VWG9 929 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms