RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 DSG1Q02413 1049 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 STX1AQ16623 288 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 ZACNQ401N2 412 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 CEP135Q66GS9 1140 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 KLHL10Q6JEL2 608 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 FUT10Q6P4F1 479 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 SASS6Q6UVJ0 657 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 TRAPPC11Q7Z392 1133 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 LIMS2Q7Z4I7 341 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 IRF2BP1Q8IU81 584 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 CSGALNACT2Q8N6G5 542 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 MRPL43Q8N983 215 aaKnown RBP16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 ENOX1Q8TC92 643 aaKnown RBP16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 CCDC127Q96BQ5 260 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 VRTNQ9H8Y1 702 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 RXFP1Q9HBX9 757 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 TLR9Q9NR96 1032 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 CACNG4Q9UBN1 327 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 TDRD15B5MCY1 1934 aaKnown RBP16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 ANK1P16157 1881 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 PDCD11Q14690 1871 aaKnown RBP16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 NLRC5Q86WI3 1866 aa16.78■□□□□ 0.28
POLR2J3-218ENST00000513506 TRIP11Q15643 1979 aa16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 SYN3O14994 580 aa16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 PNPLA4P41247 253 aa16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 ERVFC1P60507 584 aa16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 RBP5P82980 135 aa16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 TFAMQ00059 246 aaKnown RBP16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 MRPL58Q14197 206 aaKnown RBP16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 USP41Q3LFD5 358 aa16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 TAS1R1Q7RTX1 841 aa16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 VPS52Q8N1B4 723 aa16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 NOC3LQ8WTT2 800 aaKnown RBP16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 ANKRD36BP1Q96IX9 119 aa16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 POP1Q99575 1024 aaKnown RBP16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 MTMR12Q9C0I1 747 aa16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 GDAP2Q9NXN4 497 aa16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 ARMCX3Q9UH62 379 aaPredicted RBP16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 SSX2IPQ9Y2D8 614 aa16.77■□□□□ 0.28
POLR2J3-218ENST00000513506 TBC1D4O60343 1298 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 TNNC2P02585 160 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 FAM163BP0C2L3 166 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 TMEM191BP0C7N4 346 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 DLATP10515 647 aaKnown RBP16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 KRT13P13646 458 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 TNNI1P19237 187 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 GUCY2FP51841 1108 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 DLG4P78352 724 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 TYRO3Q06418 890 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 TIGD5Q53EQ6 642 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 TRIM59Q8IWR1 403 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 PIK3R5Q8WYR1 880 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 RABGGTAQ92696 567 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 SLC35C1Q96A29 364 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 GAS2L1Q99501 681 aaPredicted RBP16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 BPIFA3Q9BQP9 254 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 SRRTQ9BXP5 876 aaKnown RBP16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 THAP9Q9H5L6 903 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 FNIP2Q9P278 1114 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 COQ4Q9Y3A0 265 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 MYO9BQ13459 2157 aa16.76■□□□□ 0.27
POLR2J3-218ENST00000513506 PPEF2O14830 753 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 SPTLC1O15269 473 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 STX10O60499 249 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 CYP11A1P05108 521 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 PRKCSHP14314 528 aaPredicted RBP16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 TYMPP19971 482 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 ATICP31939 592 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 STX17P56962 302 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 SMC1AQ14683 1233 aaKnown RBP16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 BMS1Q14692 1282 aaKnown RBP16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 PTPN14Q15678 1187 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 PDXDC1Q6P996 788 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 SV2AQ7L0J3 742 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 SPATA18Q8TC71 538 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 EEF2KMTQ96G04 330 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 FAXDC2Q96IV6 333 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 FAM161BQ96MY7 647 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 TTPALQ9BTX7 342 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 XYLT2Q9H1B5 865 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 PCDHB8Q9UN66 801 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 STXBP5LQ9Y2K9 1186 aa16.75■□□□□ 0.27
POLR2J3-218ENST00000513506 ARHGEF37A1IGU5 675 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 FSD2A1L4K1 749 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 C2orf71A6NGG8 1288 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 OAZ2O95190 189 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 CST3P01034 146 aaPredicted RBP16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 ITGB3P05106 788 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 IRS1P35568 1242 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 GLUD2P49448 558 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 TAF6P49848 677 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 PPP3CAQ08209 521 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 KCNC3Q14003 757 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 TDRD10Q5VZ19 366 aaKnown RBP16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 SCARA3Q6AZY7 606 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 DPH6Q7L8W6 267 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 TMC7Q7Z402 723 aa16.74■□□□□ 0.27
POLR2J3-218ENST00000513506 TMEM130Q8N3G9 435 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms