RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 RAPH1Q70E73 1250 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 SLC13A5Q86YT5 568 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-211ENST00000513346 ADGRF4Q8IZF3 695 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 RNF217Q8TC41 542 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 FAM149B1Q96BN6 582 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 FAF2Q96CS3 445 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 C18orf8Q96DM3 657 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 FAM20AQ96MK3 541 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 PPP1R16BQ96T49 567 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 CDC42EP4Q9H3Q1 356 aaKnown RBP11.85□□□□□ -0.51
TCOF1-211ENST00000513346 TRIM33Q9UPN9 1127 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 TRIM49P0CI25 452 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 TRIM49CP0CI26 452 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 PBX1P40424 430 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 SLC1A1P43005 524 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 PEX5P50542 639 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 IZUMO2Q6UXV1 221 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 BTBD6Q96KE9 485 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 SLC13A1Q9BZW2 595 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 TCHHQ07283 1943 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 WDR64B1ANS9 1081 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 RASSF9O75901 435 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 ECE1P42892 770 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 PDZD4Q76G19 769 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-211ENST00000513346 C1orf131Q8NDD1 294 aaKnown RBP11.85□□□□□ -0.51
TCOF1-211ENST00000513346 DDI1Q8WTU0 396 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 SCG3Q8WXD2 468 aaKnown RBP11.85□□□□□ -0.51
TCOF1-211ENST00000513346 ACAP3Q96P50 834 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 TBC1D22BQ9NU19 505 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 FLT1P17948 1338 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 CNTNAP5Q8WYK1 1306 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 SYNJ2BP-COX16A0A087WUM0 186 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 RCCD1A6NED2 376 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 ATP6V1B1P15313 513 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 BTKQ06187 659 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 ANKMY2Q8IV38 441 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 XXYLT1Q8NBI6 393 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 OTUD5Q96G74 571 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 FAM49AQ9H0Q0 323 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-211ENST00000513346 SEMA6BQ9H3T3 888 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 CCDC134Q9H6E4 229 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 COX16Q9P0S2 106 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 APEX2Q9UBZ4 518 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 REXO2Q9Y3B8 237 aaKnown RBP11.84□□□□□ -0.51
TCOF1-211ENST00000513346 A0A087X0B3 334 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 A0A0A6YYK5 440 aaPredicted RBP11.84□□□□□ -0.51
TCOF1-211ENST00000513346 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 PYGBP11216 843 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 ATP6V1C1P21283 382 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 KCNV1Q6PIU1 500 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 POTEGQ6S5H5 508 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 POTEEQ6S8J3 1075 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 MTDHQ86UE4 582 aaKnown RBP11.84□□□□□ -0.51
TCOF1-211ENST00000513346 MICALL2Q8IY33 904 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 INPP5DQ92835 1189 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 WARS2Q9UGM6 360 aaKnown RBP11.84□□□□□ -0.51
TCOF1-211ENST00000513346 TLK1Q9UKI8 766 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 LZTS1Q9Y250 596 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 ABLIM1O14639 778 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 KLHL2O95198 593 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 VAMP7P51809 220 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 PSMC1P62191 440 aaKnown RBP11.84□□□□□ -0.51
TCOF1-211ENST00000513346 LRRC74BQ6ZQY2 392 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 FASTKD5Q7L8L6 764 aaKnown RBP11.84□□□□□ -0.51
TCOF1-211ENST00000513346 PPP2R3CQ969Q6 453 aa11.84□□□□□ -0.51
TCOF1-211ENST00000513346 GOLGA8IPA6NC78 632 aa11.83□□□□□ -0.51
TCOF1-211ENST00000513346 GOLGA8JA6NMD2 632 aa11.83□□□□□ -0.51
TCOF1-211ENST00000513346 RIPK2O43353 540 aa11.83□□□□□ -0.51
TCOF1-211ENST00000513346 ESRRBO95718 433 aa11.83□□□□□ -0.51
TCOF1-211ENST00000513346 EPHB2P29323 1055 aa11.83□□□□□ -0.51
TCOF1-211ENST00000513346 PRELPP51888 382 aa11.83□□□□□ -0.51
TCOF1-211ENST00000513346 MKRN4PQ13434 485 aaPredicted RBP11.83□□□□□ -0.51
TCOF1-211ENST00000513346 QPCTQ16769 361 aa11.83□□□□□ -0.51
TCOF1-211ENST00000513346 ACAD11Q709F0 780 aa11.83□□□□□ -0.51
TCOF1-211ENST00000513346 SCUBE1Q8IWY4 988 aa11.83□□□□□ -0.51
TCOF1-211ENST00000513346 MCPH1Q8NEM0 835 aa11.83□□□□□ -0.51
TCOF1-211ENST00000513346 CCT7Q99832 543 aa11.83□□□□□ -0.51
TCOF1-211ENST00000513346 GORASP1Q9BQQ3 440 aa11.83□□□□□ -0.51
TCOF1-211ENST00000513346 SMYD2Q9NRG4 433 aa11.83□□□□□ -0.51
TCOF1-211ENST00000513346 WHRNQ9P202 907 aa11.83□□□□□ -0.51
TCOF1-211ENST00000513346 RNF103-CHMP3A0A140T963 221 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 GYS1P13807 737 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 GSTT1P30711 240 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 KRT76Q01546 638 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 OVGP1Q12889 678 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 RHPN2Q8IUC4 686 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 C7orf31Q8N865 590 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 ZSWIM1Q9BR11 485 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 C11orf70Q9BRQ4 267 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 SIKE1Q9BRV8 207 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 SNX25Q9H3E2 840 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 MTMR4Q9NYA4 1195 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 SEL1LQ9UBV2 794 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 TNS2Q63HR2 1409 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 ZBED1O96006 694 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 FDX1P10109 184 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 FMO5P49326 533 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 ADRM1Q16186 407 aa11.83□□□□□ -0.52
TCOF1-211ENST00000513346 ZNF507Q8TCN5 953 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms