RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 SCARA3Q6AZY7 606 aa22.7■■□□□ 1.22
NEIL3-202ENST00000513321 TRAPPC11Q7Z392 1133 aa22.7■■□□□ 1.22
NEIL3-202ENST00000513321 MYLIPQ8WY64 445 aa22.7■■□□□ 1.22
NEIL3-202ENST00000513321 GAS2L1Q99501 681 aaPredicted RBP22.7■■□□□ 1.22
NEIL3-202ENST00000513321 DNAJC25Q9H1X3 360 aa22.7■■□□□ 1.22
NEIL3-202ENST00000513321 TLR9Q9NR96 1032 aa22.7■■□□□ 1.22
NEIL3-202ENST00000513321 ARMCX3Q9UH62 379 aaPredicted RBP22.7■■□□□ 1.22
NEIL3-202ENST00000513321 ITGA11Q9UKX5 1188 aa22.7■■□□□ 1.22
NEIL3-202ENST00000513321 AGAP1Q9UPQ3 857 aa22.7■■□□□ 1.22
NEIL3-202ENST00000513321 KRT19P08727 400 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 TRIM49P0CI25 452 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 TRIM49CP0CI26 452 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 CCDC192P0DO97 292 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 IGFBP4P22692 258 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 POLR2BP30876 1174 aaKnown RBP22.69■■□□□ 1.22
NEIL3-202ENST00000513321 BRCC3P46736 316 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 AP3M2P53677 418 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 PTPROQ16827 1216 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 ZSCAN23Q3MJ62 389 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 CCDC40Q4G0X9 1142 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 FRMD5Q7Z6J6 570 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 CXorf38Q8TB03 319 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 MICAL1Q8TDZ2 1067 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 MRPL38Q96DV4 380 aaKnown RBP22.69■■□□□ 1.22
NEIL3-202ENST00000513321 METTL14Q9HCE5 456 aaKnown RBP22.69■■□□□ 1.22
NEIL3-202ENST00000513321 STK39Q9UEW8 545 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 SIX4Q9UIU6 781 aa22.69■■□□□ 1.22
NEIL3-202ENST00000513321 SF3B1O75533 1304 aaKnown RBP eCLIP22.69■■□□□ 1.22
NEIL3-202ENST00000513321 I3L4J1 428 aa22.68■■□□□ 1.22
NEIL3-202ENST00000513321 TRAPPC3O43617 180 aa22.68■■□□□ 1.22
NEIL3-202ENST00000513321 GNA14O95837 355 aa22.68■■□□□ 1.22
NEIL3-202ENST00000513321 C4BPAP04003 597 aaKnown RBP22.68■■□□□ 1.22
NEIL3-202ENST00000513321 SOD2P04179 222 aa22.68■■□□□ 1.22
NEIL3-202ENST00000513321 LILRA4P59901 499 aa22.68■■□□□ 1.22
NEIL3-202ENST00000513321 RBP5P82980 135 aa22.68■■□□□ 1.22
NEIL3-202ENST00000513321 FAM171A1Q5VUB5 890 aa22.68■■□□□ 1.22
NEIL3-202ENST00000513321 TMC7Q7Z402 723 aa22.68■■□□□ 1.22
NEIL3-202ENST00000513321 RNF168Q8IYW5 571 aaPredicted RBP22.68■■□□□ 1.22
NEIL3-202ENST00000513321 LMCD1Q9NZU5 365 aa22.68■■□□□ 1.22
NEIL3-202ENST00000513321 POU3F3P20264 500 aaPredicted RBP22.67■■□□□ 1.22
NEIL3-202ENST00000513321 IRS1P35568 1242 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 ELAVL2Q12926 359 aaKnown RBP22.67■■□□□ 1.22
NEIL3-202ENST00000513321 ANO6Q4KMQ2 910 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 TIGD5Q53EQ6 642 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 ENOX1Q8TC92 643 aaKnown RBP22.67■■□□□ 1.22
NEIL3-202ENST00000513321 B3GALT6Q96L58 329 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 TCF25Q9BQ70 676 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 FUCA2Q9BTY2 467 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 ZBP1Q9H171 429 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 ENTPD7Q9NQZ7 604 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 R3HCC1Q9Y3T6 440 aaKnown RBP22.67■■□□□ 1.22
NEIL3-202ENST00000513321 MTCH2Q9Y6C9 303 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 CDH23Q9H251 3354 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 PLXNA4Q9HCM2 1894 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 SPTLC1O15269 473 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 PHACTR2O75167 634 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 CXCL14O95715 111 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 CST3P01034 146 aaPredicted RBP22.67■■□□□ 1.22
NEIL3-202ENST00000513321 GCLMP48507 274 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 PPP3CAQ08209 521 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 BIRC3Q13489 604 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 USP41Q3LFD5 358 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 TCERG1LQ5VWI1 586 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 TDRD10Q5VZ19 366 aaKnown RBP22.67■■□□□ 1.22
NEIL3-202ENST00000513321 SV2AQ7L0J3 742 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 IRF2BP1Q8IU81 584 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 HERC2P3Q9BVR0 1158 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 CHST7Q9NS84 486 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 PCDHGC5Q9Y5F6 944 aa22.67■■□□□ 1.22
NEIL3-202ENST00000513321 FSCN2O14926 492 aa22.66■■□□□ 1.22
NEIL3-202ENST00000513321 CTSAP10619 480 aa22.66■■□□□ 1.22
NEIL3-202ENST00000513321 PAX3P23760 479 aa22.66■■□□□ 1.22
NEIL3-202ENST00000513321 AARSP49588 968 aaKnown RBP eCLIP22.66■■□□□ 1.22
NEIL3-202ENST00000513321 TAF6P49848 677 aa22.66■■□□□ 1.22
NEIL3-202ENST00000513321 BMS1Q14692 1282 aaKnown RBP22.66■■□□□ 1.22
NEIL3-202ENST00000513321 DCAF17Q5H9S7 520 aaPredicted RBP22.66■■□□□ 1.22
NEIL3-202ENST00000513321 PDE12Q6L8Q7 609 aaKnown RBP22.66■■□□□ 1.22
NEIL3-202ENST00000513321 KIAA1841Q6NSI8 718 aa22.66■■□□□ 1.22
NEIL3-202ENST00000513321 CEP57Q86XR8 500 aa22.66■■□□□ 1.22
NEIL3-202ENST00000513321 CREBRFQ8IUR6 639 aa22.66■■□□□ 1.22
NEIL3-202ENST00000513321 LRRC52Q8N7C0 313 aa22.66■■□□□ 1.22
NEIL3-202ENST00000513321 AUTS2Q8WXX7 1259 aa22.66■■□□□ 1.22
NEIL3-202ENST00000513321 SUSD3Q96L08 255 aa22.66■■□□□ 1.22
NEIL3-202ENST00000513321 THAP9Q9H5L6 903 aa22.66■■□□□ 1.22
NEIL3-202ENST00000513321 MMRN2Q9H8L6 949 aa22.66■■□□□ 1.22
NEIL3-202ENST00000513321 NGRNQ9NPE2 291 aaKnown RBP22.66■■□□□ 1.22
NEIL3-202ENST00000513321 STX10O60499 249 aa22.65■■□□□ 1.22
NEIL3-202ENST00000513321 GTF2H1P32780 548 aa22.65■■□□□ 1.22
NEIL3-202ENST00000513321 PNPLA4P41247 253 aa22.65■■□□□ 1.22
NEIL3-202ENST00000513321 MARSP56192 900 aaKnown RBP22.65■■□□□ 1.22
NEIL3-202ENST00000513321 TRPC3Q13507 836 aa22.65■■□□□ 1.22
NEIL3-202ENST00000513321 ZACNQ401N2 412 aa22.65■■□□□ 1.22
NEIL3-202ENST00000513321 PLPP4Q5VZY2 271 aa22.65■■□□□ 1.22
NEIL3-202ENST00000513321 DSTYKQ6XUX3 929 aa22.65■■□□□ 1.22
NEIL3-202ENST00000513321 C15orf39Q6ZRI6 1047 aa22.65■■□□□ 1.22
NEIL3-202ENST00000513321 MRPL43Q8N983 215 aaKnown RBP22.65■■□□□ 1.22
NEIL3-202ENST00000513321 ZNF560Q96MR9 790 aa22.65■■□□□ 1.22
NEIL3-202ENST00000513321 TTPALQ9BTX7 342 aa22.65■■□□□ 1.22
NEIL3-202ENST00000513321 NAT10Q9H0A0 1025 aaKnown RBP22.65■■□□□ 1.22
NEIL3-202ENST00000513321 COL4A4P53420 1690 aaPredicted RBP22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms