RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 POMKQ9H5K3 350 aa19.26■□□□□ 0.67
DDR1-272ENST00000513243 MTRRQ9UBK8 725 aa19.26■□□□□ 0.67
DDR1-272ENST00000513243 DPP7Q9UHL4 492 aa19.26■□□□□ 0.67
DDR1-272ENST00000513243 BDP1A6H8Y1 2624 aa19.26■□□□□ 0.67
DDR1-272ENST00000513243 GOLGA8IPA6NC78 632 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 SPDYE4A6NLX3 237 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 GOLGA8JA6NMD2 632 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 LOC730098B7Z3J9 87 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 SYN3O14994 580 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 MTHFRP42898 656 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 WNT7BP56706 349 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 ATAT1Q5SQI0 421 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 VARS2Q5ST30 1063 aaKnown RBP19.25■□□□□ 0.67
DDR1-272ENST00000513243 ARMCX5Q6P1M9 558 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 ANKS3Q6ZW76 656 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 BEST2Q8NFU1 509 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 HDAC7Q8WUI4 952 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 RPGRIP1Q96KN7 1286 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 RIPOR3Q96MK2 946 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 NECTIN4Q96NY8 510 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 PLEKHA4Q9H4M7 779 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 SLC39A2Q9NP94 309 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 C2CD2Q9Y426 696 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 BACE2Q9Y5Z0 518 aa19.25■□□□□ 0.67
DDR1-272ENST00000513243 PPEF2O14830 753 aa19.24■□□□□ 0.67
DDR1-272ENST00000513243 TGFB1I1O43294 461 aa19.24■□□□□ 0.67
DDR1-272ENST00000513243 EXTL3O43909 919 aa19.24■□□□□ 0.67
DDR1-272ENST00000513243 RFPL2O75678 378 aa19.24■□□□□ 0.67
DDR1-272ENST00000513243 IL18RAPO95256 599 aa19.24■□□□□ 0.67
DDR1-272ENST00000513243 LDHAP00338 332 aaKnown RBP19.24■□□□□ 0.67
DDR1-272ENST00000513243 OR1D2P34982 312 aa19.24■□□□□ 0.67
DDR1-272ENST00000513243 RAB33AQ14088 237 aa19.24■□□□□ 0.67
DDR1-272ENST00000513243 ELMSAN1Q6PJG2 1045 aa19.24■□□□□ 0.67
DDR1-272ENST00000513243 BRSK2Q8IWQ3 736 aa19.24■□□□□ 0.67
DDR1-272ENST00000513243 EFCAB13Q8IY85 973 aa19.24■□□□□ 0.67
DDR1-272ENST00000513243 KREMEN2Q8NCW0 462 aa19.24■□□□□ 0.67
DDR1-272ENST00000513243 CMASQ8NFW8 434 aaPredicted RBP19.24■□□□□ 0.67
DDR1-272ENST00000513243 EPHX3Q9H6B9 360 aa19.24■□□□□ 0.67
DDR1-272ENST00000513243 CDY1Q9Y6F8 540 aa19.24■□□□□ 0.67
DDR1-272ENST00000513243 CCDC195A0A1B0GUA6 201 aa19.23■□□□□ 0.67
DDR1-272ENST00000513243 TBC1D4O60343 1298 aa19.23■□□□□ 0.67
DDR1-272ENST00000513243 AARSP49588 968 aaKnown RBP eCLIP19.23■□□□□ 0.67
DDR1-272ENST00000513243 MRPL58Q14197 206 aaKnown RBP19.23■□□□□ 0.67
DDR1-272ENST00000513243 KMT5BQ4FZB7 885 aa19.23■□□□□ 0.67
DDR1-272ENST00000513243 C9orf57Q5W0N0 161 aa19.23■□□□□ 0.67
DDR1-272ENST00000513243 C15orf39Q6ZRI6 1047 aa19.23■□□□□ 0.67
DDR1-272ENST00000513243 NELFCDQ8IXH7 590 aa19.23■□□□□ 0.67
DDR1-272ENST00000513243 GPD1LQ8N335 351 aa19.23■□□□□ 0.67
DDR1-272ENST00000513243 NOC3LQ8WTT2 800 aaKnown RBP19.23■□□□□ 0.67
DDR1-272ENST00000513243 RBAKQ9NYW8 714 aaPredicted RBP19.23■□□□□ 0.67
DDR1-272ENST00000513243 FBXW11Q9UKB1 542 aa19.23■□□□□ 0.67
DDR1-272ENST00000513243 PCDHB8Q9UN66 801 aa19.23■□□□□ 0.67
DDR1-272ENST00000513243 UBE4BO95155 1302 aa19.23■□□□□ 0.67
DDR1-272ENST00000513243 ANK1P16157 1881 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 ANO9A1A5B4 782 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 M0QZQ0 153 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 PIRO00625 290 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 KIAA0391O15091 583 aaKnown RBP19.22■□□□□ 0.67
DDR1-272ENST00000513243 ZNF202O95125 648 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 PAPLNO95428 1278 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 MYL1P05976 194 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 SP100P23497 879 aaPredicted RBP19.22■□□□□ 0.67
DDR1-272ENST00000513243 STK4Q13043 487 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 BMT2Q1RMZ1 405 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 KRBA2Q6ZNG9 492 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 RNF135Q8IUD6 432 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 APPL2Q8NEU8 664 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 ZNF707Q96C28 371 aaPredicted RBP19.22■□□□□ 0.67
DDR1-272ENST00000513243 AGPAT3Q9NRZ7 376 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 EXOC1Q9NV70 894 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 DPP3Q9NY33 737 aa19.22■□□□□ 0.67
DDR1-272ENST00000513243 PI4K2BG5E9Z4 385 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 H7C4K7 107 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 TULP1O00294 542 aaPredicted RBP19.21■□□□□ 0.67
DDR1-272ENST00000513243 SPTLC1O15269 473 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 ZMYND10O75800 440 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 PRR29P0C7W0 189 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 LILRA4P59901 499 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 SLC8B1Q6J4K2 584 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 NT5DC4Q86YG4 428 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 KIAA0895Q8NCT3 520 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 RHOBTB2Q9BYZ6 727 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 PDE11AQ9HCR9 933 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 TSHZ2Q9NRE2 1034 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 ZDHHC7Q9NXF8 308 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 HSPBP1Q9NZL4 362 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 FBXL5Q9UKA1 691 aa19.21■□□□□ 0.67
DDR1-272ENST00000513243 TIMM13Q9Y5L4 95 aaPredicted RBP19.21■□□□□ 0.67
DDR1-272ENST00000513243 CLIC2O15247 247 aa19.2■□□□□ 0.66
DDR1-272ENST00000513243 RPN1P04843 607 aaKnown RBP19.2■□□□□ 0.66
DDR1-272ENST00000513243 TFAMQ00059 246 aaKnown RBP19.2■□□□□ 0.66
DDR1-272ENST00000513243 PSMD2Q13200 908 aa19.2■□□□□ 0.66
DDR1-272ENST00000513243 KNOP1Q1ED39 458 aaKnown RBP19.2■□□□□ 0.66
DDR1-272ENST00000513243 CTXN3Q4LDR2 81 aa19.2■□□□□ 0.66
DDR1-272ENST00000513243 CYP26C1Q6V0L0 522 aa19.2■□□□□ 0.66
DDR1-272ENST00000513243 DSTYKQ6XUX3 929 aa19.2■□□□□ 0.66
DDR1-272ENST00000513243 CBWD2Q8IUF1 395 aa19.2■□□□□ 0.66
DDR1-272ENST00000513243 SMG7Q92540 1137 aaKnown RBP19.2■□□□□ 0.66
DDR1-272ENST00000513243 FAM84AQ96KN4 292 aa19.2■□□□□ 0.66
DDR1-272ENST00000513243 PRKD2Q9BZL6 878 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms