RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 MARS2Q96GW9 593 aaKnown RBP5.86□□□□□ -1.47
CHD1-210ENST00000513064 MLST8Q9BVC4 326 aa5.86□□□□□ -1.47
CHD1-210ENST00000513064 SCAND2PQ9GZW5 306 aaPredicted RBP5.86□□□□□ -1.47
CHD1-210ENST00000513064 KMT5AQ9NQR1 393 aa5.86□□□□□ -1.47
CHD1-210ENST00000513064 PCDHA3Q9Y5H8 950 aa5.86□□□□□ -1.47
CHD1-210ENST00000513064 CCDC78A2IDD5 438 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 PPM1GO15355 546 aaPredicted RBP5.85□□□□□ -1.47
CHD1-210ENST00000513064 AKAP8O43823 692 aaKnown RBP5.85□□□□□ -1.47
CHD1-210ENST00000513064 AGFG2O95081 481 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 ABHD16AO95870 558 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 ADH4P08319 380 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 PRDX5P30044 214 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 ZNF267Q14586 743 aaPredicted RBP5.85□□□□□ -1.47
CHD1-210ENST00000513064 LRRC41Q15345 812 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 LY6G5CQ5SRR4 150 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 CXorf57Q6NSI4 855 aaKnown RBP5.85□□□□□ -1.47
CHD1-210ENST00000513064 B3GNT9Q6UX72 402 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 HEATR3Q7Z4Q2 680 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 FAM90A1Q86YD7 464 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 ARHGEF19Q8IW93 802 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 GRAMD1CQ8IYS0 662 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 CHPFQ8IZ52 775 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 FAM43AQ8N2R8 423 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 AMER2Q8N7J2 671 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 CPEB3Q8NE35 698 aaKnown RBP5.85□□□□□ -1.47
CHD1-210ENST00000513064 SLC35G2Q8TBE7 412 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 PROKR1Q8TCW9 393 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 DIS3LQ8TF46 1054 aaKnown RBP5.85□□□□□ -1.47
CHD1-210ENST00000513064 LARP4BQ92615 738 aaKnown RBP5.85□□□□□ -1.47
CHD1-210ENST00000513064 FUBP1Q96AE4 644 aaKnown RBP5.85□□□□□ -1.47
CHD1-210ENST00000513064 FAM167AQ96KS9 214 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 PNKPQ96T60 521 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 ADAM2Q99965 735 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 ZSWIM1Q9BR11 485 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 KRTAP4-11Q9BYQ6 195 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 TMPRSS5Q9H3S3 457 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 WDCPQ9H6R7 721 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 NMRK2Q9NPI5 230 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 GNL3LQ9NVN8 582 aaKnown RBP5.85□□□□□ -1.47
CHD1-210ENST00000513064 MAP3K2Q9Y2U5 619 aa5.85□□□□□ -1.47
CHD1-210ENST00000513064 PRSS29PA6NIE9 313 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 LPXNO60711 386 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 SCGB1D2O95969 90 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 ANXA1P04083 346 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 ALDH2P05091 517 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 U2AF1L5P0DN76 240 aaPredicted RBP5.84□□□□□ -1.47
CHD1-210ENST00000513064 FCER1AP12319 257 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 HSPA6P17066 643 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 IL12RB1P42701 662 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 HSD11B2P80365 405 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 MXRA7P84157 204 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 U2AF1Q01081 240 aaKnown RBP eCLIP5.84□□□□□ -1.47
CHD1-210ENST00000513064 RESTQ13127 1097 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 PPP2R5AQ15172 486 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 CCDC93Q567U6 631 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 FAM102BQ5T8I3 360 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 NXNQ6DKJ4 435 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 Q6ZPA2 131 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 PDSS2Q86YH6 399 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 BOD1Q96IK1 185 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 CDK5RAP3Q96JB5 506 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 KLHL32Q96NJ5 620 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 MED15Q96RN5 788 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 PCED1AQ9H1Q7 454 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 ANLNQ9NQW6 1124 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 LMBRD1Q9NUN5 540 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 TMEM74BQ9NUR3 256 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 RLIMQ9NVW2 624 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 HSFX1Q9UBD0 423 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 ABCF2Q9UG63 623 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 USP25Q9UHP3 1055 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 KCNE5Q9UJ90 142 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 SLC45A2Q9UMX9 530 aa5.84□□□□□ -1.47
CHD1-210ENST00000513064 AATKQ6ZMQ8 1374 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 H3BML4 177 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 GPANK1O95872 356 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 TYRP14679 529 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 CXADRP78310 365 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 NKX6-1P78426 367 aaPredicted RBP5.83□□□□□ -1.48
CHD1-210ENST00000513064 GUCY1B3Q02153 619 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 KLF10Q13118 480 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 PTPAQ15257 358 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 SPDYE7PQ495Y7 208 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 KCNV1Q6PIU1 500 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 FOXR2Q6PJQ5 311 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 ZNF627Q7L945 461 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 AOPEPQ8N6M6 819 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 Q8NA96 180 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 LRGUKQ96M69 825 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 TAAR9Q96RI9 348 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 TLR10Q9BXR5 811 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 MRPL46Q9H2W6 279 aaKnown RBP5.83□□□□□ -1.48
CHD1-210ENST00000513064 SERHL2Q9H4I8 314 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 TCEAL9Q9UHQ7 104 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 G3BP2Q9UN86 482 aaKnown RBP5.83□□□□□ -1.48
CHD1-210ENST00000513064 NR2E3Q9Y5X4 410 aa5.83□□□□□ -1.48
CHD1-210ENST00000513064 MYADML2A6NDP7 307 aa5.82□□□□□ -1.48
CHD1-210ENST00000513064 TSPAN6O43657 245 aa5.82□□□□□ -1.48
CHD1-210ENST00000513064 CDKL5O76039 1030 aa5.82□□□□□ -1.48
CHD1-210ENST00000513064 SPDEFO95238 335 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms