RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 FLYWCH1Q4VC44 716 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 PABPC1LQ4VXU2 614 aaKnown RBP5.19□□□□□ -1.58
HTT-210ENST00000512909 KHDC1LQ5JSQ8 128 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 RNF220Q5VTB9 566 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 B3GNT9Q6UX72 402 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 NPNTQ6UXI9 565 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 C11orf96Q7Z7L8 435 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 ACRBPQ8NEB7 543 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 FBXO41Q8TF61 875 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 TNPO1Q92973 898 aaKnown RBP5.19□□□□□ -1.58
HTT-210ENST00000512909 TMEM60Q9H2L4 133 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 CFAP97Q9P2B7 532 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 PCDHA1Q9Y5I3 950 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 CNTLNQ9NXG0 1405 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 SUPT6HQ7KZ85 1726 aaKnown RBP5.19□□□□□ -1.58
HTT-210ENST00000512909 MBD5Q9P267 1494 aa5.19□□□□□ -1.58
HTT-210ENST00000512909 ATP7AQ04656 1500 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 ANKRD30AQ9BXX3 1397 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 CDC42BPAQ5VT25 1732 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 DIP2CQ9Y2E4 1556 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 RTEL1-TNFRSF6BF6WH68 1400 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 MIA2Q96PC5 1412 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 LRRC14BA6NHZ5 514 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 GOLGA6L6A8MZA4 724 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 GOLIM4O00461 696 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 GRM6O15303 877 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 PJA2O43164 708 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 ZBED1O96006 694 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 ALDH1A3P47895 512 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 SLC6A9P48067 706 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 ZNF280AP59817 542 aaPredicted RBP5.18□□□□□ -1.58
HTT-210ENST00000512909 SATB1Q01826 763 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 DSC2Q02487 901 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 TLE1Q04724 770 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 MTM1Q13496 603 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 CNGB1Q14028 1251 aaPredicted RBP5.18□□□□□ -1.58
HTT-210ENST00000512909 CNN3Q15417 329 aaKnown RBP5.18□□□□□ -1.58
HTT-210ENST00000512909 SLC44A4Q53GD3 710 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 XYLT1Q86Y38 959 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 FITM2Q8N6M3 262 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 FAM156AQ8NDB6 213 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 IFI44Q8TCB0 444 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 ATXN2LQ8WWM7 1075 aaKnown RBP5.18□□□□□ -1.58
HTT-210ENST00000512909 CFHR4Q92496 578 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 HOXB13Q92826 284 aaPredicted RBP5.18□□□□□ -1.58
HTT-210ENST00000512909 LOXL4Q96JB6 756 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 TEPSINQ96N21 525 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 PSMD1Q99460 953 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 LRRC27Q9C0I9 530 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 SIK2Q9H0K1 926 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 ADAM7Q9H2U9 754 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 BRD9Q9H8M2 597 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 ARNT2Q9HBZ2 717 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 STAP2Q9UGK3 403 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 OGDHLQ9ULD0 1010 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 TPCN1Q9ULQ1 816 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 SIK3Q9Y2K2 1263 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 TCAF1Q9Y4C2 921 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 SNX13Q9Y5W8 968 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 CCDC141Q6ZP82 1450 aa5.18□□□□□ -1.58
HTT-210ENST00000512909 KIF15Q9NS87 1388 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 TCRBV7S2A1N4TA0A589 114 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 TBKBP1A7MCY6 615 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 CXorf49A8MYA2 514 aaPredicted RBP5.17□□□□□ -1.58
HTT-210ENST00000512909 MYO1CO00159 1063 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 TPP1O14773 563 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 PHGDHO43175 533 aaKnown RBP5.17□□□□□ -1.58
HTT-210ENST00000512909 RAD17O75943 681 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 MAP4K4O95819 1239 aaPredicted RBP5.17□□□□□ -1.58
HTT-210ENST00000512909 AMY1AP04745 511 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 SPATA31D3P0C874 917 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 TRIM27P14373 513 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 TYRP14679 529 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 PHKG2P15735 406 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 ALOX15P16050 662 aaPredicted RBP5.17□□□□□ -1.58
HTT-210ENST00000512909 HK1P19367 917 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 FPR1P21462 350 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 GUCY1A2P33402 732 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 PIK3CGP48736 1102 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 IFIT5Q13325 482 aaKnown RBP5.17□□□□□ -1.58
HTT-210ENST00000512909 FZD5Q13467 585 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 SNAPC2Q13487 334 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 SAFB2Q14151 953 aaKnown RBP eCLIP5.17□□□□□ -1.58
HTT-210ENST00000512909 TBC1D10BQ4KMP7 808 aaPredicted RBP5.17□□□□□ -1.58
HTT-210ENST00000512909 MFSD14BQ5SR56 506 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 OTUD7BQ6GQQ9 843 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 SPATA31D4Q6ZUB0 917 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 MAEAQ7L5Y9 396 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 OVCH2Q7RTZ1 564 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 UBE3BQ7Z3V4 1068 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 PLXDC1Q8IUK5 500 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 ELOA2Q8IYF1 753 aaPredicted RBP5.17□□□□□ -1.58
HTT-210ENST00000512909 GPR135Q8IZ08 494 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 ZGPATQ8N5A5 531 aaKnown RBP5.17□□□□□ -1.58
HTT-210ENST00000512909 LRTOMTQ8WZ04 291 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 MIEF2Q96C03 454 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 MRGPRX4Q96LA9 322 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 SAMD11Q96NU1 681 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 KCNC2Q96PR1 638 aa5.17□□□□□ -1.58
HTT-210ENST00000512909 SARGQ9BW04 601 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms