RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 SYPP08247 313 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 DRD1P21728 446 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 ITPKAP23677 461 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 DNM2P50570 870 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 LY6DQ14210 128 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 TARBP2Q15633 366 aaKnown RBP10.47□□□□□ -0.73
CLCN3-208ENST00000512813 PKDCCQ504Y2 493 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 LMBRD2Q68DH5 695 aaPredicted RBP10.47□□□□□ -0.73
CLCN3-208ENST00000512813 ANO7Q6IWH7 933 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 NIPA1Q7RTP0 329 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 ZNF589Q86UQ0 364 aaPredicted RBP10.47□□□□□ -0.73
CLCN3-208ENST00000512813 TMC8Q8IU68 726 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 TCEAL8Q8IYN2 117 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 HS6ST3Q8IZP7 471 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 ELMOD1Q8N336 334 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 SNIP1Q8TAD8 396 aaKnown RBP10.47□□□□□ -0.73
CLCN3-208ENST00000512813 ZNF461Q8TAF7 563 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 RRP36Q96EU6 259 aaKnown RBP10.47□□□□□ -0.73
CLCN3-208ENST00000512813 NLRP4Q96MN2 994 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 FNBP1Q96RU3 617 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 SPZ1Q9BXG8 430 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 EIF2AQ9BY44 585 aaKnown RBP10.47□□□□□ -0.73
CLCN3-208ENST00000512813 ASAH2Q9NR71 780 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 NRBP2Q9NSY0 501 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 CACNG4Q9UBN1 327 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 GIT1Q9Y2X7 761 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 BACE2Q9Y5Z0 518 aa10.47□□□□□ -0.73
CLCN3-208ENST00000512813 SETD2Q9BYW2 2564 aaPredicted RBP10.46□□□□□ -0.73
CLCN3-208ENST00000512813 FAM149AA5PLN7 773 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 IPO5O00410 1097 aaKnown RBP10.46□□□□□ -0.73
CLCN3-208ENST00000512813 TERTO14746 1132 aaKnown RBP10.46□□□□□ -0.73
CLCN3-208ENST00000512813 ABLIM3O94929 683 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 MYL4P12829 197 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 FGFR3P22607 806 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 ADSSP30520 456 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 P2RY2P41231 377 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 ROR1Q01973 937 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 TLE3Q04726 772 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 SMAD1Q15797 465 aaKnown RBP10.46□□□□□ -0.73
CLCN3-208ENST00000512813 MCMDC2Q4G0Z9 681 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 C4orf17Q53FE4 359 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 IQCEQ6IPM2 695 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 ARID3BQ8IVW6 561 aaPredicted RBP10.46□□□□□ -0.73
CLCN3-208ENST00000512813 MDGA1Q8NFP4 955 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 SHKBP1Q8TBC3 707 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 BAHD1Q8TBE0 780 aaPredicted RBP10.46□□□□□ -0.73
CLCN3-208ENST00000512813 MED8Q96G25 268 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 SPACA7Q96KW9 195 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 TRIM4Q9C037 500 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 SUCLA2Q9P2R7 463 aaPredicted RBP10.46□□□□□ -0.73
CLCN3-208ENST00000512813 SEC63Q9UGP8 760 aaKnown RBP10.46□□□□□ -0.73
CLCN3-208ENST00000512813 HES2Q9Y543 173 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 PAXBP1Q9Y5B6 917 aa10.46□□□□□ -0.73
CLCN3-208ENST00000512813 SPTBN1Q01082 2364 aaKnown RBP10.46□□□□□ -0.74
CLCN3-208ENST00000512813 BOD1L1Q8NFC6 3051 aa10.46□□□□□ -0.74
CLCN3-208ENST00000512813 ATF2P15336 505 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 ELF1P32519 619 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 TUSC3Q13454 348 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 NBR1Q14596 966 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 SLC8B1Q6J4K2 584 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 KSR1Q8IVT5 923 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 PANK1Q8TE04 598 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 CCDC51Q96ER9 411 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 FAM227BQ96M60 508 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 CEP89Q96ST8 783 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 KRT23Q9C075 422 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 FZD8Q9H461 694 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 MINDY3Q9H8M7 445 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 FBRSL1Q9HCM7 1045 aaKnown RBP10.45□□□□□ -0.74
CLCN3-208ENST00000512813 TBC1D22BQ9NU19 505 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 ZBTB40Q9NUA8 1239 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 CEP72Q9P209 647 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 TCEAL9Q9UHQ7 104 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 TPCN1Q9ULQ1 816 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 CENPEQ02224 2701 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 POLQO75417 2590 aa10.45□□□□□ -0.74
CLCN3-208ENST00000512813 TLN1Q9Y490 2541 aaKnown RBP10.45□□□□□ -0.74
CLCN3-208ENST00000512813 KNTC1P50748 2209 aa10.44□□□□□ -0.74
CLCN3-208ENST00000512813 CASTOR2A6NHX0 329 aa10.44□□□□□ -0.74
CLCN3-208ENST00000512813 PLK4O00444 970 aa10.44□□□□□ -0.74
CLCN3-208ENST00000512813 DPYSL4O14531 572 aa10.44□□□□□ -0.74
CLCN3-208ENST00000512813 ATXN1LP0C7T5 689 aaKnown RBP10.44□□□□□ -0.74
CLCN3-208ENST00000512813 PREPLQ4J6C6 727 aaPredicted RBP10.44□□□□□ -0.74
CLCN3-208ENST00000512813 C2orf27AQ580R0 203 aa10.44□□□□□ -0.74
CLCN3-208ENST00000512813 SRGAP1Q7Z6B7 1085 aa10.44□□□□□ -0.74
CLCN3-208ENST00000512813 HACE1Q8IYU2 909 aa10.44□□□□□ -0.74
CLCN3-208ENST00000512813 BPIFB1Q8TDL5 484 aa10.44□□□□□ -0.74
CLCN3-208ENST00000512813 TTC9Q92623 222 aa10.44□□□□□ -0.74
CLCN3-208ENST00000512813 EZH1Q92800 747 aaPredicted RBP10.44□□□□□ -0.74
CLCN3-208ENST00000512813 ZNF512Q96ME7 567 aaPredicted RBP10.44□□□□□ -0.74
CLCN3-208ENST00000512813 NXF3Q9H4D5 531 aaKnown RBP10.44□□□□□ -0.74
CLCN3-208ENST00000512813 CYP4F11Q9HBI6 524 aa10.44□□□□□ -0.74
CLCN3-208ENST00000512813 HELZP42694 1942 aaKnown RBP10.44□□□□□ -0.74
CLCN3-208ENST00000512813 ARID2Q68CP9 1835 aa10.43□□□□□ -0.74
CLCN3-208ENST00000512813 IGLV3-22A0A075B6J6 115 aa10.43□□□□□ -0.74
CLCN3-208ENST00000512813 A0A1W2PRU2 124 aa10.43□□□□□ -0.74
CLCN3-208ENST00000512813 SEC24AO95486 1093 aa10.43□□□□□ -0.74
CLCN3-208ENST00000512813 SREBF1P36956 1147 aa10.43□□□□□ -0.74
CLCN3-208ENST00000512813 MCM2P49736 904 aa10.43□□□□□ -0.74
CLCN3-208ENST00000512813 AMPD2Q01433 879 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms