RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 FOXD4L4Q8WXT5 416 aaPredicted RBP13.1□□□□□ -0.31
CDK7-208ENST00000512687 DDX12PQ92771 950 aa13.1□□□□□ -0.31
CDK7-208ENST00000512687 SUSD3Q96L08 255 aa13.1□□□□□ -0.31
CDK7-208ENST00000512687 FGFBP2Q9BYJ0 223 aa13.1□□□□□ -0.31
CDK7-208ENST00000512687 KCNK12Q9HB15 430 aa13.1□□□□□ -0.31
CDK7-208ENST00000512687 PIDD1Q9HB75 910 aa13.1□□□□□ -0.31
CDK7-208ENST00000512687 BACE2Q9Y5Z0 518 aa13.1□□□□□ -0.31
CDK7-208ENST00000512687 COL4A2P08572 1712 aa13.1□□□□□ -0.31
CDK7-208ENST00000512687 NUP210Q8TEM1 1887 aaPredicted RBP13.1□□□□□ -0.31
CDK7-208ENST00000512687 WDR27A2RRH5 827 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 PPEF2O14830 753 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 TRAPPC3O43617 180 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 NARSO43776 548 aaKnown RBP13.09□□□□□ -0.31
CDK7-208ENST00000512687 ADRB2P07550 413 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 HNRNPA1P09651 372 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDK7-208ENST00000512687 LRPAP1P30533 357 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 HOXA9P31269 272 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 RPL9P32969 192 aaKnown RBP13.09□□□□□ -0.31
CDK7-208ENST00000512687 PPP2R3AQ06190 1150 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 KCNA1Q09470 495 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 MRPL58Q14197 206 aaKnown RBP13.09□□□□□ -0.31
CDK7-208ENST00000512687 PPM1LQ5SGD2 360 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 LIN9Q5TKA1 542 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 SLC8B1Q6J4K2 584 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 ST13P5Q8NFI4 369 aaPredicted RBP13.09□□□□□ -0.31
CDK7-208ENST00000512687 STRA6Q9BX79 667 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 PANK2Q9BZ23 570 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 ST6GALNAC4Q9H4F1 302 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 PLEKHA5Q9HAU0 1116 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 HCFC1R1Q9NWW0 138 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 TFIP11Q9UBB9 837 aaKnown RBP13.09□□□□□ -0.31
CDK7-208ENST00000512687 EPS15L1Q9UBC2 864 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 CCDC39Q9UFE4 941 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 CPSF3Q9UKF6 684 aaKnown RBP13.09□□□□□ -0.31
CDK7-208ENST00000512687 DUSP12Q9UNI6 340 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 TICRRQ7Z2Z1 1910 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 PATJQ8NI35 1801 aa13.09□□□□□ -0.31
CDK7-208ENST00000512687 KIF26AQ9ULI4 1882 aaPredicted RBP13.08□□□□□ -0.32
CDK7-208ENST00000512687 SYN3O14994 580 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 NFICP08651 508 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 SCP2P22307 547 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 MCM4P33991 863 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 TXLNAP40222 546 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 STAT6P42226 847 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 CASP5P51878 434 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 TDGQ13569 410 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 PKP1Q13835 747 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 STK38Q15208 465 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 JADE1Q6IE81 842 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 SV2BQ7L1I2 683 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 ZNF720Q7Z2F6 126 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 SUGP1Q8IWZ8 645 aaKnown RBP13.08□□□□□ -0.32
CDK7-208ENST00000512687 PDILTQ8N807 584 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 ZSWIM2Q8NEG5 633 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 STAMQ92783 540 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 MSTO1Q9BUK6 570 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 RPF1Q9H9Y2 349 aaKnown RBP13.08□□□□□ -0.32
CDK7-208ENST00000512687 TBC1D7Q9P0N9 293 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 FBXL5Q9UKA1 691 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 NUB1Q9Y5A7 615 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 GTF3C3Q9Y5Q9 886 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 STYXL1Q9Y6J8 313 aa13.08□□□□□ -0.32
CDK7-208ENST00000512687 ZNF638Q14966 1978 aaKnown RBP13.08□□□□□ -0.32
CDK7-208ENST00000512687 FRMD3A2A2Y4 597 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 M0QZQ0 153 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 ABLIM3O94929 683 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 SEC24AO95486 1093 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 FSHRP23945 695 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 ADSSP30520 456 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 AARSP49588 968 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDK7-208ENST00000512687 ACOT2P49753 483 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 ARPP19P56211 112 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 NHLH1Q02575 133 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 HTR4Q13639 388 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 E2F4Q16254 413 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 CRELD2Q6UXH1 353 aaPredicted RBP13.07□□□□□ -0.32
CDK7-208ENST00000512687 HSCBQ8IWL3 235 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 ITFG1Q8TB96 612 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 DCBLD2Q96PD2 775 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 KCNH6Q9H252 994 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 DNMT3BQ9UBC3 853 aaKnown RBP13.07□□□□□ -0.32
CDK7-208ENST00000512687 UBQLN1Q9UMX0 589 aaKnown RBP13.07□□□□□ -0.32
CDK7-208ENST00000512687 POLIQ9UNA4 740 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 PTPRDP23468 1912 aa13.07□□□□□ -0.32
CDK7-208ENST00000512687 GREB1Q4ZG55 1949 aa13.06□□□□□ -0.32
CDK7-208ENST00000512687 ANHXE9PGG2 379 aa13.06□□□□□ -0.32
CDK7-208ENST00000512687 NRG2O14511 850 aaPredicted RBP13.06□□□□□ -0.32
CDK7-208ENST00000512687 SPTLC2O15270 562 aa13.06□□□□□ -0.32
CDK7-208ENST00000512687 VNN2O95498 520 aa13.06□□□□□ -0.32
CDK7-208ENST00000512687 POU2F2P09086 479 aa13.06□□□□□ -0.32
CDK7-208ENST00000512687 LAMP2P13473 410 aa13.06□□□□□ -0.32
CDK7-208ENST00000512687 CYP3A5P20815 502 aa13.06□□□□□ -0.32
CDK7-208ENST00000512687 AVPR2P30518 371 aa13.06□□□□□ -0.32
CDK7-208ENST00000512687 WNT7BP56706 349 aa13.06□□□□□ -0.32
CDK7-208ENST00000512687 TCF15Q12870 199 aa13.06□□□□□ -0.32
CDK7-208ENST00000512687 KYAT1Q16773 422 aa13.06□□□□□ -0.32
CDK7-208ENST00000512687 SLC5A9Q2M3M2 681 aa13.06□□□□□ -0.32
CDK7-208ENST00000512687 UVSSAQ2YD98 709 aa13.06□□□□□ -0.32
CDK7-208ENST00000512687 FOXD4L6Q3SYB3 417 aaPredicted RBP13.06□□□□□ -0.32
CDK7-208ENST00000512687 CTXN3Q4LDR2 81 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms