RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 REPS2Q8NFH8 660 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 SCYL1Q96KG9 808 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 TTC25Q96NG3 672 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 TRIM51Q9BSJ1 452 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 PPME1Q9Y570 386 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 ADORA2AP29274 412 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 CARSP49589 748 aaKnown RBP13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 ARSEP51690 589 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 MAGOHP61326 146 aaKnown RBP13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 NME3Q13232 169 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 HEATR6Q6AI08 1181 aaKnown RBP13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 PFDN6O15212 129 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 CIB2O75838 187 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 ITGA4P13612 1032 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 UBA1P22314 1058 aaKnown RBP13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 PTGER2P43116 358 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 PPIL2Q13356 520 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 ECM1Q16610 540 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 MTMR8Q96EF0 704 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 CFAP36Q96G28 342 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 VIPAS39Q9H9C1 493 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 SLC38A7Q9NVC3 462 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 USP20Q9Y2K6 914 aa13.85□□□□□ -0.19
PCDHA4-202ENST00000512229 KRT37O76014 449 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 CYP2C19P33261 490 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 KCNJ1P48048 391 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 ZPBP2Q6X784 338 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 RAPH1Q70E73 1250 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 C1orf131Q8NDD1 294 aaKnown RBP13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 DHX38Q92620 1227 aaKnown RBP13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 PGBD4Q96DM1 585 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 GPBP1L1Q9HC44 474 aaPredicted RBP13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 UBQLN1Q9UMX0 589 aaKnown RBP13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 IQANK1A0A1B0GTG1 560 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 GRAP2O75791 330 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 DCAF4L1Q3SXM0 396 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 TATDN2Q93075 761 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 VTA1Q9NP79 307 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 OSGEPQ9NPF4 335 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 SPEF2Q9C093 1822 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 TCHHQ07283 1943 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 RASA4BC9J798 803 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 RASA4O43374 803 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 STAG3L1P0CL83 205 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 ZFXP17010 805 aaPredicted RBP13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 HSD17B4P51659 736 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 EIF3EP60228 445 aaKnown RBP13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 ROR1Q01973 937 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 C2CD6Q53TS8 623 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 GLRA4Q5JXX5 417 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 SLC47A2Q86VL8 602 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 CD302Q8IX05 232 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 DPP3Q9NY33 737 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 PRKAG2Q9UGJ0 569 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 CAPN7Q9Y6W3 813 aa13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 PHRF1Q9P1Y6 1649 aaKnown RBP13.84□□□□□ -0.19
PCDHA4-202ENST00000512229 TRAPPC3O43617 180 aa13.83□□□□□ -0.19
PCDHA4-202ENST00000512229 MYL6P60660 151 aa13.83□□□□□ -0.19
PCDHA4-202ENST00000512229 HP1BP3Q5SSJ5 553 aaPredicted RBP13.83□□□□□ -0.19
PCDHA4-202ENST00000512229 C1orf228Q6PIY5 440 aa13.83□□□□□ -0.19
PCDHA4-202ENST00000512229 SYDE1Q6ZW31 735 aaPredicted RBP13.83□□□□□ -0.19
PCDHA4-202ENST00000512229 JAMLQ86YT9 394 aa13.83□□□□□ -0.19
PCDHA4-202ENST00000512229 WDR49Q8IV35 697 aa13.83□□□□□ -0.19
PCDHA4-202ENST00000512229 SRRM1Q8IYB3 904 aaKnown RBP13.83□□□□□ -0.19
PCDHA4-202ENST00000512229 PPFIBP2Q8ND30 876 aa13.83□□□□□ -0.19
PCDHA4-202ENST00000512229 UBA3Q8TBC4 463 aa13.83□□□□□ -0.19
PCDHA4-202ENST00000512229 SLC20A1Q8WUM9 679 aa13.83□□□□□ -0.19
PCDHA4-202ENST00000512229 TISP43B9A030 160 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 ARSHQ5FYA8 562 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 MIIPQ5JXC2 388 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 SPOPLQ6IQ16 392 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 LRRC31Q6UY01 552 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 TRIM42Q8IWZ5 723 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 GSDMBQ8TAX9 411 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 TRAPPC12Q8WVT3 735 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 CYFIP2Q96F07 1278 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 GLT1D1Q96MS3 346 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 ERP44Q9BS26 406 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 SIK2Q9H0K1 926 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 VAV3Q9UKW4 847 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 C17orf102A2RUQ5 167 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 LIG3P49916 1009 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 FCGRTP55899 365 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 PDIA2Q13087 525 aaKnown RBP13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 SV2CQ496J9 727 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 CBWD6Q4V339 395 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 COBLL1Q53SF7 1204 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 CBWD3Q5JTY5 395 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 CBWD5Q5RIA9 395 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 MOB2Q70IA6 237 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 IRF2BP1Q8IU81 584 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 HNRNPLLQ8WVV9 542 aaKnown RBP13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 MED15Q96RN5 788 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 PDGFDQ9GZP0 370 aaPredicted RBP13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 NKRFO15226 690 aaKnown RBP eCLIP13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 RRM1P23921 792 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 GTF2BQ00403 316 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 NUGGCQ68CJ6 796 aa13.83□□□□□ -0.2
PCDHA4-202ENST00000512229 DDX42Q86XP3 938 aaKnown RBP eCLIP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms