RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 DHX32Q7L7V1 743 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 TMC3Q7Z5M5 1100 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 TREML1Q86YW5 311 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 ITPRIPQ8IWB1 547 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 NUP93Q8N1F7 819 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 PPM1KQ8N3J5 372 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 DCLK2Q8N568 766 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 CCDC150Q8NCX0 1101 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 UHMK1Q8TAS1 419 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 BAHD1Q8TBE0 780 aaPredicted RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 PTCD2Q8WV60 388 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 RABGGTAQ92696 567 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 DDX27Q96GQ7 796 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 KRT23Q9C075 422 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 POLD4Q9HCU8 107 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 MED4Q9NPJ6 270 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 LGALS13Q9UHV8 139 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 MTUS1Q9ULD2 1270 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZBTB21Q9ULJ3 1066 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 TRAF3IP3Q9Y228 551 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 GMEB1Q9Y692 573 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 ITPR3Q14573 2671 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 TANC2Q9HCD6 1990 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 CXorf51AA0A1B0GTR3 108 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 GSTTP1A0A1W2PQM5 241 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 ESYT2A0FGR8 921 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 TCAF2A6NFQ2 919 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 ERICH4A6NGS2 130 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 PRR33A8MZF0 331 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 PDE8BO95263 885 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 ERBB2P04626 1255 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 IQCF3P0C7M6 154 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 PYGBP11216 843 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 CASTP20810 708 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 ARNTP27540 789 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 RFC4P35249 363 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 RFC1P35251 1148 aaPredicted RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 ARL1P40616 181 aaPredicted RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 HDAC4P56524 1084 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 CNTN2Q02246 1040 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 NONOQ15233 471 aaKnown RBP eCLIP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 WDR78Q5VTH9 848 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 MIS18BP1Q6P0N0 1132 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZNF449Q6P9G9 518 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 PAOXQ6QHF9 649 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 RUFY4Q6ZNE9 571 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 PATL1Q86TB9 770 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 RSPH3Q86UC2 560 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 EPHX4Q8IUS5 362 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 AMER2Q8N7J2 671 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 HPS3Q969F9 1004 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 MIEF2Q96C03 454 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 KREMEN1Q96MU8 473 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 ASPSCR1Q9BZE9 553 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 MUC3BQ9H195 1237 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 SEMA4AQ9H3S1 761 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 GPBP1L1Q9HC44 474 aaPredicted RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 KIAA1586Q9HCI6 787 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 PTPRHQ9HD43 1115 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 GNL3LQ9NVN8 582 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 OSER1Q9NX31 292 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 CEP72Q9P209 647 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 CCDC168Q8NDH2 2452 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 A0A1B0GTL3 188 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 TRIM49BA6NDI0 452 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 MAP3K7O43318 606 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 NOL3O60936 208 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 CCNB2O95067 398 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 SHMT1P34896 483 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 CCT5P48643 541 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 PLCD1P51178 756 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 PNOCQ13519 176 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 DAZAP2Q15038 168 aaPredicted RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 NHSL2Q5HYW2 709 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 LARP1BQ659C4 914 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 IQCEQ6IPM2 695 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 KDM7AQ6ZMT4 941 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 TMTC3Q6ZXV5 915 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 NOL8Q76FK4 1167 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 MIGA2Q7L4E1 593 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZNF571Q7Z3V5 609 aaPredicted RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 APBB1IPQ7Z5R6 666 aaPredicted RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 MTERF4Q7Z6M4 381 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 IGDCC3Q8IVU1 814 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 C10orf67Q8IYJ2 551 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 CNTROBQ8N137 903 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 SLAIN1Q8ND83 568 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 FBF1Q8TES7 1133 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 FAM151AQ8WW52 585 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 CLDN23Q96B33 292 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 EVI5LQ96CN4 794 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 C1QTNF1Q9BXJ1 281 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 IQCGQ9H095 443 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 VCXQ9H320 206 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 ST6GALNAC4Q9H4F1 302 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 USP29Q9HBJ7 922 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 ACP6Q9NPH0 428 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 FAM198AQ9UFP1 575 aa1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 CHORDC1Q9UHD1 332 aaPredicted RBP1.79□□□□□ -2.12
TRAPPC13-211ENST00000512009 ZNF225Q9UK10 706 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms