RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 LRRC31Q6UY01 552 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 ZPBP2Q6X784 338 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 SNX19Q92543 992 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 UBE2ZQ9H832 354 aaPredicted RBP13.31□□□□□ -0.28
LIN54-210ENST00000510877 TJP2Q9UDY2 1190 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 SART1O43290 800 aaKnown RBP13.31□□□□□ -0.28
LIN54-210ENST00000510877 C22orf31O95567 290 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 KRT10P13645 584 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 FSHRP23945 695 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 GCLMP48507 274 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 CCDC15Q0P6D6 951 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 KNOP1Q1ED39 458 aaKnown RBP13.31□□□□□ -0.28
LIN54-210ENST00000510877 ASAP3Q8TDY4 903 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 ZFP42Q96MM3 310 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 CCSER1Q9C0I3 900 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 TBC1D13Q9NVG8 400 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 ZMYM2Q9UBW7 1377 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 ZNF831Q5JPB2 1677 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 PVALEFA0A1B0GWK0 134 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 MYOGP15173 224 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 UBXN1Q04323 297 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 CAPSQ13938 189 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 NAALADL2Q58DX5 795 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 ZC3H14Q6PJT7 736 aaKnown RBP13.31□□□□□ -0.28
LIN54-210ENST00000510877 GIPC2Q8TF65 315 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 BHMTQ93088 406 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 SKA1Q96BD8 255 aa13.31□□□□□ -0.28
LIN54-210ENST00000510877 PAX3P23760 479 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 SLC39A12Q504Y0 691 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 RPAINQ86UA6 219 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 LINC00301Q8NCQ3 95 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 SYNDIG1Q9H7V2 258 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 POLR2AP24928 1970 aaKnown RBP13.3□□□□□ -0.28
LIN54-210ENST00000510877 FGF19O95750 216 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 MOCS2O96007 188 aaPredicted RBP13.3□□□□□ -0.28
LIN54-210ENST00000510877 PBX2P40425 430 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 MAK16Q9BXY0 300 aaKnown RBP13.3□□□□□ -0.28
LIN54-210ENST00000510877 ASB7Q9H672 318 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 RBM47A0AV96 593 aaKnown RBP13.3□□□□□ -0.28
LIN54-210ENST00000510877 NR3C1P04150 777 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 NTRK3Q16288 839 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 KRBA2Q6ZNG9 492 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 ADGRF2Q8IZF7 708 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 MLKLQ8NB16 471 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 ING5Q8WYH8 240 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 ATOH1Q92858 354 aaPredicted RBP13.3□□□□□ -0.28
LIN54-210ENST00000510877 SENP8Q96LD8 212 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 RUSC1Q9BVN2 902 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 IRF2BPLQ9H1B7 796 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 HSPBP1Q9NZL4 362 aa13.3□□□□□ -0.28
LIN54-210ENST00000510877 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.3□□□□□ -0.28
LIN54-210ENST00000510877 TBC1D3BA6NDS4 549 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 EXTL3O43909 919 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 ALDH1A2O94788 518 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 CDC25CP30307 473 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 HARS2P49590 506 aaKnown RBP13.29□□□□□ -0.28
LIN54-210ENST00000510877 ANO5Q75V66 913 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 MTSS1LQ765P7 747 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 TOP1MTQ969P6 601 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 MRPL38Q96DV4 380 aaKnown RBP13.29□□□□□ -0.28
LIN54-210ENST00000510877 PLEKHA4Q9H4M7 779 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 PDE11AQ9HCR9 933 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 SMPD4Q9NXE4 827 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 IPO11Q9UI26 975 aaKnown RBP13.29□□□□□ -0.28
LIN54-210ENST00000510877 MOSPD1Q9UJG1 213 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 GMEB2Q9UKD1 530 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 TNFSF13BQ9Y275 285 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 COMMD10Q9Y6G5 202 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 CACNA1GO43497 2377 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 COL11A2P13942 1736 aaPredicted RBP13.29□□□□□ -0.28
LIN54-210ENST00000510877 CSH1P0DML2 217 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 CSH2P0DML3 217 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 GRIN2CQ14957 1233 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 UGCGQ16739 394 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 ZC2HC1CQ53FD0 456 aaPredicted RBP13.29□□□□□ -0.28
LIN54-210ENST00000510877 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 MTMR8Q96EF0 704 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 CCDC114Q96M63 670 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 XPO6Q96QU8 1125 aaKnown RBP13.29□□□□□ -0.28
LIN54-210ENST00000510877 NIFKQ9BYG3 293 aaKnown RBP13.29□□□□□ -0.28
LIN54-210ENST00000510877 DDX43Q9NXZ2 648 aaKnown RBP13.29□□□□□ -0.28
LIN54-210ENST00000510877 MYH3P11055 1940 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 ARFGEF1Q9Y6D6 1849 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 SSC5DA1L4H1 1573 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 LAMTOR5O43504 91 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 RNASEH1O60930 286 aaKnown RBP13.29□□□□□ -0.28
LIN54-210ENST00000510877 FAM200BP0CF97 657 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 RAD51Q06609 339 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 NCOA4Q13772 614 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 SGSM1Q2NKQ1 1148 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 C12orf50Q8NA57 414 aaPredicted RBP13.29□□□□□ -0.28
LIN54-210ENST00000510877 USP20Q9Y2K6 914 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 AKAP11Q9UKA4 1901 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 OR6C75A6NL08 312 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 NRP1O14786 923 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 ZNF830Q96NB3 372 aaPredicted RBP13.29□□□□□ -0.28
LIN54-210ENST00000510877 CIPCQ9C0C6 399 aa13.29□□□□□ -0.28
LIN54-210ENST00000510877 CCDC195A0A1B0GUA6 201 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 ZMYND10O75800 440 aa13.28□□□□□ -0.28
LIN54-210ENST00000510877 GABRR2P28476 465 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms