RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 RPN1P04843 607 aaKnown RBP19.72■□□□□ 0.75
CLDND1-220ENST00000508902 MRPL58Q14197 206 aaKnown RBP19.72■□□□□ 0.75
CLDND1-220ENST00000508902 TMEM132DQ14C87 1099 aa19.72■□□□□ 0.75
CLDND1-220ENST00000508902 RARS2Q5T160 578 aaKnown RBP19.72■□□□□ 0.75
CLDND1-220ENST00000508902 C9orf57Q5W0N0 161 aa19.72■□□□□ 0.75
CLDND1-220ENST00000508902 KIAA1841Q6NSI8 718 aa19.72■□□□□ 0.75
CLDND1-220ENST00000508902 ARMCX5Q6P1M9 558 aa19.72■□□□□ 0.75
CLDND1-220ENST00000508902 PALB2Q86YC2 1186 aa19.72■□□□□ 0.75
CLDND1-220ENST00000508902 ERCC4Q92889 916 aaPredicted RBP19.72■□□□□ 0.75
CLDND1-220ENST00000508902 KCTD10Q9H3F6 313 aa19.72■□□□□ 0.75
CLDND1-220ENST00000508902 ASB7Q9H672 318 aa19.72■□□□□ 0.75
CLDND1-220ENST00000508902 MAN1C1Q9NR34 630 aa19.72■□□□□ 0.75
CLDND1-220ENST00000508902 HSPBP1Q9NZL4 362 aa19.72■□□□□ 0.75
CLDND1-220ENST00000508902 DOCK8Q8NF50 2099 aa19.71■□□□□ 0.75
CLDND1-220ENST00000508902 C19orf67A6NJJ6 358 aa19.71■□□□□ 0.75
CLDND1-220ENST00000508902 PIRO00625 290 aa19.71■□□□□ 0.75
CLDND1-220ENST00000508902 RFPL2O75678 378 aa19.71■□□□□ 0.75
CLDND1-220ENST00000508902 ADH1AP07327 375 aa19.71■□□□□ 0.75
CLDND1-220ENST00000508902 POU5F1Q01860 360 aaKnown RBP19.71■□□□□ 0.75
CLDND1-220ENST00000508902 PUS10Q3MIT2 529 aaKnown RBP19.71■□□□□ 0.75
CLDND1-220ENST00000508902 VARS2Q5ST30 1063 aaKnown RBP19.71■□□□□ 0.75
CLDND1-220ENST00000508902 CD302Q8IX05 232 aa19.71■□□□□ 0.75
CLDND1-220ENST00000508902 PDE11AQ9HCR9 933 aa19.71■□□□□ 0.75
CLDND1-220ENST00000508902 EXOC1Q9NV70 894 aa19.71■□□□□ 0.75
CLDND1-220ENST00000508902 RBAKQ9NYW8 714 aaPredicted RBP19.71■□□□□ 0.75
CLDND1-220ENST00000508902 DERAQ9Y315 318 aa19.71■□□□□ 0.75
CLDND1-220ENST00000508902 C2CD2Q9Y426 696 aa19.71■□□□□ 0.75
CLDND1-220ENST00000508902 M0QZQ0 153 aa19.7■□□□□ 0.74
CLDND1-220ENST00000508902 RHOBTB3O94955 611 aa19.7■□□□□ 0.74
CLDND1-220ENST00000508902 PAPLNO95428 1278 aa19.7■□□□□ 0.74
CLDND1-220ENST00000508902 ELAVL2Q12926 359 aaKnown RBP19.7■□□□□ 0.74
CLDND1-220ENST00000508902 PNOCQ13519 176 aa19.7■□□□□ 0.74
CLDND1-220ENST00000508902 BMS1Q14692 1282 aaKnown RBP19.7■□□□□ 0.74
CLDND1-220ENST00000508902 LMBRD2Q68DH5 695 aaPredicted RBP19.7■□□□□ 0.74
CLDND1-220ENST00000508902 GPD1LQ8N335 351 aa19.7■□□□□ 0.74
CLDND1-220ENST00000508902 C1orf127Q8N9H9 656 aa19.7■□□□□ 0.74
CLDND1-220ENST00000508902 PLEKHO2Q8TD55 490 aa19.7■□□□□ 0.74
CLDND1-220ENST00000508902 ZNF707Q96C28 371 aaPredicted RBP19.7■□□□□ 0.74
CLDND1-220ENST00000508902 BORCS6Q96GS4 357 aa19.7■□□□□ 0.74
CLDND1-220ENST00000508902 ADAM7Q9H2U9 754 aa19.7■□□□□ 0.74
CLDND1-220ENST00000508902 POMKQ9H5K3 350 aa19.7■□□□□ 0.74
CLDND1-220ENST00000508902 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.7■□□□□ 0.74
CLDND1-220ENST00000508902 SSX2IPQ9Y2D8 614 aa19.7■□□□□ 0.74
CLDND1-220ENST00000508902 GLUD1P00367 558 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 MYL1P05976 194 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 HOXB8P17481 243 aaPredicted RBP19.69■□□□□ 0.74
CLDND1-220ENST00000508902 MCM4P33991 863 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 KNOP1Q1ED39 458 aaKnown RBP19.69■□□□□ 0.74
CLDND1-220ENST00000508902 TMC5Q6UXY8 1006 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 STXBP4Q6ZWJ1 553 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 PPFIBP1Q86W92 1011 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 ADHFE1Q8IWW8 467 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 TMEM87AQ8NBN3 555 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 BEST2Q8NFU1 509 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 OR5B17Q8NGF7 314 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 TSPAN18Q96SJ8 248 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 DZANK1Q9NVP4 752 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 CHMP5Q9NZZ3 219 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 SIX4Q9UIU6 781 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 FBXW11Q9UKB1 542 aa19.69■□□□□ 0.74
CLDND1-220ENST00000508902 TIMM13Q9Y5L4 95 aaPredicted RBP19.69■□□□□ 0.74
CLDND1-220ENST00000508902 SYN3O14994 580 aa19.68■□□□□ 0.74
CLDND1-220ENST00000508902 IL18RAPO95256 599 aa19.68■□□□□ 0.74
CLDND1-220ENST00000508902 VNN2O95498 520 aa19.68■□□□□ 0.74
CLDND1-220ENST00000508902 OR1D2P34982 312 aa19.68■□□□□ 0.74
CLDND1-220ENST00000508902 CYP2J2P51589 502 aa19.68■□□□□ 0.74
CLDND1-220ENST00000508902 LILRA4P59901 499 aa19.68■□□□□ 0.74
CLDND1-220ENST00000508902 FAM160A1Q05DH4 1040 aa19.68■□□□□ 0.74
CLDND1-220ENST00000508902 C12orf56Q8IXR9 622 aa19.68■□□□□ 0.74
CLDND1-220ENST00000508902 SMYD4Q8IYR2 804 aaPredicted RBP19.68■□□□□ 0.74
CLDND1-220ENST00000508902 NOC3LQ8WTT2 800 aaKnown RBP19.68■□□□□ 0.74
CLDND1-220ENST00000508902 DPP3Q9NY33 737 aa19.68■□□□□ 0.74
CLDND1-220ENST00000508902 PCDHB8Q9UN66 801 aa19.68■□□□□ 0.74
CLDND1-220ENST00000508902 NUB1Q9Y5A7 615 aa19.68■□□□□ 0.74
CLDND1-220ENST00000508902 BACE2Q9Y5Z0 518 aa19.68■□□□□ 0.74
CLDND1-220ENST00000508902 CDY1Q9Y6F8 540 aa19.68■□□□□ 0.74
CLDND1-220ENST00000508902 WDR27A2RRH5 827 aa19.67■□□□□ 0.74
CLDND1-220ENST00000508902 ANP32AP39687 249 aaKnown RBP19.67■□□□□ 0.74
CLDND1-220ENST00000508902 RAB33AQ14088 237 aa19.67■□□□□ 0.74
CLDND1-220ENST00000508902 CBX2Q14781 532 aaPredicted RBP19.67■□□□□ 0.74
CLDND1-220ENST00000508902 GPR149Q86SP6 731 aa19.67■□□□□ 0.74
CLDND1-220ENST00000508902 SPATA20Q8TB22 786 aa19.67■□□□□ 0.74
CLDND1-220ENST00000508902 MTMR12Q9C0I1 747 aa19.67■□□□□ 0.74
CLDND1-220ENST00000508902 SFXN1Q9H9B4 322 aa19.67■□□□□ 0.74
CLDND1-220ENST00000508902 DMAC2Q9NW81 257 aa19.67■□□□□ 0.74
CLDND1-220ENST00000508902 FBXL5Q9UKA1 691 aa19.67■□□□□ 0.74
CLDND1-220ENST00000508902 LOC730098B7Z3J9 87 aa19.66■□□□□ 0.74
CLDND1-220ENST00000508902 TNFRSF10AO00220 468 aa19.66■□□□□ 0.74
CLDND1-220ENST00000508902 LDHAP00338 332 aaKnown RBP19.66■□□□□ 0.74
CLDND1-220ENST00000508902 SRGAP2BP0DMP2 458 aa19.66■□□□□ 0.74
CLDND1-220ENST00000508902 ROR1Q01973 937 aa19.66■□□□□ 0.74
CLDND1-220ENST00000508902 PSMD2Q13200 908 aa19.66■□□□□ 0.74
CLDND1-220ENST00000508902 KCNB1Q14721 858 aa19.66■□□□□ 0.74
CLDND1-220ENST00000508902 SLC8B1Q6J4K2 584 aa19.66■□□□□ 0.74
CLDND1-220ENST00000508902 GJD3Q8N144 294 aa19.66■□□□□ 0.74
CLDND1-220ENST00000508902 RDH13Q8NBN7 331 aa19.66■□□□□ 0.74
CLDND1-220ENST00000508902 KREMEN2Q8NCW0 462 aa19.66■□□□□ 0.74
CLDND1-220ENST00000508902 CMASQ8NFW8 434 aaPredicted RBP19.66■□□□□ 0.74
CLDND1-220ENST00000508902 SENP8Q96LD8 212 aa19.66■□□□□ 0.74
CLDND1-220ENST00000508902 RTP3Q9BQQ7 232 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms